| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2370 |
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| Symbol | |
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| ID | 7386014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1940642 |
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| End bp | 1942489 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651507 |
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| Product | ABC transporter substrate binding protein (peptide) |
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| Protein accession | YP_002549696 |
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| Protein GI | 222148739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGATCTCGA GAGGAAATGG TTTGCGGCGT CTTTTGTCGA CCCTGCTGGT CTTGGTCCTG
CCGTTCTGCG GCGTGTTTGC CGCATCGGCT ACCTTGGCCG AGCCCGTCAA TGCCATATCC
ATGTATGGCA AACCCGCCCT GCCCGCCGAT TACAAGCACT TGCCTTACGT CAACCCTGAC
GTAAAGAAGG GCGGTCGGAT CTCTTACGGC GTGGTCGGCA CGTTCGACAG CTTCAACCCC
TTTGTCATCA AGGGCATGCG CACAACGGCG CGCGGCATCT GGGACCCTGA CTACGGCAAC
CTGTTTTACG AAACGCTGAT GACGCGCTCG GCCGGCGAAC CCTACACGCT CTACGGTCTT
CTGGCGCAGA GCGTGGAGTG GGATGATGCC CGCAGCTTCA TCCAGTTCAA CCTCAACCCC
AAGGCCCGCT GGCACGATGG CCAGCCCGTG ACGCCGGATG ACGTGATTTT CACGCTCCAG
ATCCTCCAGC AGAAAGGCCG TGCACCTTTC GACAAGCGGT TGAATGGCGT CGCCAAGATG
GAAAAGGTTG GCGAGCATAG TGTCCGCTTC ACCTTCAACG ACAAGGCCGA CCGGGAAATT
CCGCTGCTTC TGGCCTATGC AACACCGATC CTGCCGAAAC ACGCCATCGA CCCGGACCTG
TTCGAACAAT CGTCGCTGAA TGTGCCTGTT GGCTCCGGCC CCTATAAGAT CAAGGATATA
CGCCCCGGCG AGCGGATTAC CTATCAGCGC GATCCGAATT ATTGGGGCAA GGATCTTCCC
TCGAAGGTGG GTTTCGATAA TTACGACGAA GTCAGCGTAA CCTATTTTTT GCAGGACAGC
ACCCTGTTCG AAGCCTTCAA GAAGGGTGAG ATCGATCTTT ACCCTGATGG TGATTCGGCC
CATTGGCTGC GGGCTTATAA TTTTCCGGCA GCCGTGAATG GCGATGTTGT GCGCGAGACC
TTTACCCCAC AAAAACCGAC GGGCATGCTG GGATTCGTGT TCAATACCCG CCGCCCGATC
TTTGCCGATG TGAAGGTGCG CGAGGCGCTG ACGCTCGCCT TCGACTTCGA GTGGGTCAAC
AAAAACATCT ACGGCAATGC GTTCAAGCGA ATCCAGAGTT ACTGGCAGAA TTCGCCGCTC
GGCGCCTTTG GCCATGCCGC CGACGACCGT GAGCTGGCAA TTCTCGGCAA TGCGCGCAAC
ACGATTGCCC CGGAAATCCT GGCAGGCACC TATACATTGC CGATTTCCGA TGGTTCGGGC
GCCGACCGTA ATATTCTGCG CCAGGCCGTC GCGCTGCTCA GCCAGGCTGG CTATTCGATC
AATGATGGAA AAATGGTCGA TGCCCAGGGC AAGCCACTGT CTTTCGAGGT CATGACCCAG
AATGCCGGCC AAGAGAAAAT GGCGCTTGCC TATCAGCGCA CCCTGAGGCT GATCGGCATC
GGCATGAGCA TCCGGACGGT GGATGACGCG CAATATCAGG CGCGCTCCAA CAGCTTCGAT
TATGACATGG TCGTCATGGC CTATCCTTCG ACGCTGGCTC CCGGTATCGA ACAATTCAAC
CGCTGGGGTT CCACTGCCCG GGATCGGCAA AGCAGTTTCA ATTATGCCGG TGTTGCCAAT
CCGGATATCG ACCGGGTGCT GAACACCATG GTCAATGCCA GAAGCCTCGA GGACTATCAG
GCCAGCGTGC GGGCCCTGGA TCGCCTGCTG GTGGCCGGGC ATTACGTGGT GCCGCTCTAT
TATAATGGCG AACAATGGCT GGCGCGCTGG AAGCGCATTG CAAGGCCTGA CCAGGTACCG
ATGCTGGGCT ATCAACTCCC CACCTGGTGG GATGCCAGGG CGCAATGA
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| Protein sequence | MISRGNGLRR LLSTLLVLVL PFCGVFAASA TLAEPVNAIS MYGKPALPAD YKHLPYVNPD
VKKGGRISYG VVGTFDSFNP FVIKGMRTTA RGIWDPDYGN LFYETLMTRS AGEPYTLYGL
LAQSVEWDDA RSFIQFNLNP KARWHDGQPV TPDDVIFTLQ ILQQKGRAPF DKRLNGVAKM
EKVGEHSVRF TFNDKADREI PLLLAYATPI LPKHAIDPDL FEQSSLNVPV GSGPYKIKDI
RPGERITYQR DPNYWGKDLP SKVGFDNYDE VSVTYFLQDS TLFEAFKKGE IDLYPDGDSA
HWLRAYNFPA AVNGDVVRET FTPQKPTGML GFVFNTRRPI FADVKVREAL TLAFDFEWVN
KNIYGNAFKR IQSYWQNSPL GAFGHAADDR ELAILGNARN TIAPEILAGT YTLPISDGSG
ADRNILRQAV ALLSQAGYSI NDGKMVDAQG KPLSFEVMTQ NAGQEKMALA YQRTLRLIGI
GMSIRTVDDA QYQARSNSFD YDMVVMAYPS TLAPGIEQFN RWGSTARDRQ SSFNYAGVAN
PDIDRVLNTM VNARSLEDYQ ASVRALDRLL VAGHYVVPLY YNGEQWLARW KRIARPDQVP
MLGYQLPTWW DARAQ
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