| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2312 |
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| Symbol | |
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| ID | 7386388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1898240 |
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| End bp | 1899877 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651470 |
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| Product | Bacteriophage capsid protein |
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| Protein accession | YP_002549659 |
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| Protein GI | 222148702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAA AGCCACGGGT GAGGGTGAAG GCGGGTAGCG TGAGTGCGCC CGCAGTGCGC
CCAACTGGTG CGCCCCGCAA TGGGCGCGCT TCGTCCGCCT ATATGCGCGA TAGTCAGTCC
GGTATCATTG CCTCTCGTCC GGCGTCTTTG CGTGAGCATC GTGACGAGGT TCGGCGCATC
TGGTGGCGGG CAGCGGGCCT TGCCATGGAC ATGTTGCAGA ATTCCGGCCG GTTGCGCGGG
GCTGCTGACC AGATCCTGGC CGATACCATC GGTGTCGAGC TGCAATTGAA CCCGAAGCCT
GATCTAACCC GGTTTGGCTA TGACACGCTT GAAGCCATCG AGTGGACGCG GCTGGTCAAG
GCCGAATGGA AGACATGGAG CTGGAACCCG CGTGAATGCG ATTTCCGCGC CAAGCTGACC
ATTCCGCAGC AGACAGATGT CGGCATGCGA AACTGGCTGG CTTTCGGCGA AAGCACGGGT
GTTGTAGCGT ATTTGCCGCG CTCACAGCGT CTTCCAGGCT GCCGTACCGG CACGAAAATG
CTGATGCTGT CGCCTCAAAA GCTGGTGCAG GATACCAGCG AGATGATGGG TCTCTATCAA
GGCATCTTCC ATGATGCCTA TGGCCGCCCA CAGGTCTATC GTTTTAAGGA ATGCCGGGAC
GGTTTGACCT ATACGGTGGA CTATGCGGCG GCGGATGCGG ATGGGCGACA GCTTGTTTTG
CATGCATTCG ACCCGTTTTC GGCGGAAGAC GTGCGTGGCA TTTCCGTTCT GGTGCCGACG
TTTCGCAAAT ATCTGATGGC CGAGAACACG GATGACGCGA CGGCGCAGAT CATGTTCATG
CAGACCATCT ATTCGGCGGT TCTGAAGAGC GATAAGCCGA GTGCCGAGGC GTTTGAGGCT
TTGGAAAGCT TGAAGGATAG TGGTGCTCTT GGTGTCGAGG GCATTGCACA GGATTTCGTT
GATTACTTTC GCGCCCAGCT CGACCGGGCC GCAGAATCGG AAATCCGGAT GGGTGCCGGA
GCTGGTGTGT CGCATCTCGC GCCCGGTGAA GATCTGGAGT TCAAGAACAT CACGGCGCCT
GGCTCCTATT ATAAGGATTT CATGGCGTCG TTGCACCGGG AAACGGCCCG TGCGCTTGGT
GTCAGCTATG GCGGGTATAC GCTTGACTAT ACGGCTGCCA CCTATGCCTC GACGATGATG
GAGAATTCGG CGCTTTGGCC GATTGCCCAG CGTCGGACCC AGCGAATTGC CGCACCGCAT
GTGCTTGTGC CTTACGGTAG CTGGCTGGAT GAGATGATCG AAGAGGGGCG CATTCCCTTC
AAGGGTGGTC TCGAAGTCTA CCGCGCCAAC CGTGATGCGG TGCAATGGGC GCTGTGCAAC
GGTCCGGCCA AGCCGACAGC CGACGATTTG AAGCGGGCCA AGGCTTCCAG TGAGCGGATC
GCGAACGGAA CGGGTGACCT GACTGAGGAA ATCAGCGAAT TGGGCGGCGA TGCCGAAGAG
CGGTTTGAAA GCCGCCTCTG GTGGCACACT CGCTACAAGG ATGCAGGAAT GCCATCGCCA
TTCGAGCGTG GTTTGCCGAG CGATCCAGCC GGCAGCAATG AAACTGGCGC GAGCCAGGAA
CAGACGGCAG GTGCGTGA
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| Protein sequence | MTEKPRVRVK AGSVSAPAVR PTGAPRNGRA SSAYMRDSQS GIIASRPASL REHRDEVRRI
WWRAAGLAMD MLQNSGRLRG AADQILADTI GVELQLNPKP DLTRFGYDTL EAIEWTRLVK
AEWKTWSWNP RECDFRAKLT IPQQTDVGMR NWLAFGESTG VVAYLPRSQR LPGCRTGTKM
LMLSPQKLVQ DTSEMMGLYQ GIFHDAYGRP QVYRFKECRD GLTYTVDYAA ADADGRQLVL
HAFDPFSAED VRGISVLVPT FRKYLMAENT DDATAQIMFM QTIYSAVLKS DKPSAEAFEA
LESLKDSGAL GVEGIAQDFV DYFRAQLDRA AESEIRMGAG AGVSHLAPGE DLEFKNITAP
GSYYKDFMAS LHRETARALG VSYGGYTLDY TAATYASTMM ENSALWPIAQ RRTQRIAAPH
VLVPYGSWLD EMIEEGRIPF KGGLEVYRAN RDAVQWALCN GPAKPTADDL KRAKASSERI
ANGTGDLTEE ISELGGDAEE RFESRLWWHT RYKDAGMPSP FERGLPSDPA GSNETGASQE
QTAGA
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