Gene Avi_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2300 
Symbol 
ID7386381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1889611 
End bp1890024 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content51% 
IMG OID643651463 
Producthypothetical protein 
Protein accessionYP_002549652 
Protein GI222148695 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACT ATCCGATGAT TATCGTTCCT CTTTCTGAAA ATGACGGCGG CGGCTTTATG 
TCTTTGGTTC CAGACCTTCC CGGGTGCATG TCCGATGGGG AAACACAAAG CGAAGCGCTG
CAAAATGGAT TGTTGGCCGT CAAAGAGTGG ATCGATGAGG CAAAACGTCT CGGTAAAGAA
GTACCCGAAC CCGGCGCCGC CGCAATACGT GCGGCTAAAA AGGATAGGGC AATGGCGAAG
GCATTCAAAA CACTGGCGTC CAAATTCGAC GACATCGACG GCAGGGTCCA AGATCTTGAA
GAGAATATCA AAGAGCTTTC GTCTACAGCG CAAAATATGG ACGATTGGGT CCGTTTTTCT
GGCTTGACGG GCTTACCTTT GACTGGCGAA GAGCCAAAGG CGCTTCCTTG CTAA
 
Protein sequence
MNDYPMIIVP LSENDGGGFM SLVPDLPGCM SDGETQSEAL QNGLLAVKEW IDEAKRLGKE 
VPEPGAAAIR AAKKDRAMAK AFKTLASKFD DIDGRVQDLE ENIKELSSTA QNMDDWVRFS
GLTGLPLTGE EPKALPC