Gene Avi_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2200 
Symbol 
ID7387906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1806834 
End bp1807445 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID643651387 
Producthypothetical protein 
Protein accessionYP_002549581 
Protein GI222148624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.458716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTCCT ATAACCAGGC TCCCAATAGC GGTTCAGCAC GTCCCCCGGT TCAGCGGGCG 
TTTCAGCGCG TCTCCGTGAG TCTTGAGGGT CGGCTGATGG TGCCGAGCGA GGATGAATAT 
GTCTGCCTGA CGGTGGATAT GTCACCGGGC GACGTCCGAG TGATCTGCGC TGCCCGCCCC 
GTGCCAGGTG AAAGGATCAT TGCCTATATC GACCACATCG GCCGCATCGA AGGCACCGTG 
ATCAAGACCA CCGATGATGG CTTTGTCATC AGCATTGTTG CAACGGAGCG CAAACGCGAA 
AAGCTTGCTG CTCAATTGAC CTGGATTGCC AACAAGCACG AACTGGGCCT GCCGGAAGAC 
CGCCGTCATG ACCGACTGAC ACCAAAGCAG CCGCGCACCG AACTGGTCTT TGATGACGGA 
CGTAAATATA GCTGCCGGAT CATGGACCTG TCCCTTTCCG GTGCGGCGAT CGATATCGAT 
ATTCGCCCAC CTCTTGGCAC TGCGGTGCGC CTGGGCAGCA TGCGCGGCCG CGTCGTGCGC 
CACTTCCTTG AAGGCGTTGC CATCGAGTTC ACCACCCTGC AATCCCGCGA GGCCCTGACA 
GAGTTTCTGT AG
 
Protein sequence
MYSYNQAPNS GSARPPVQRA FQRVSVSLEG RLMVPSEDEY VCLTVDMSPG DVRVICAARP 
VPGERIIAYI DHIGRIEGTV IKTTDDGFVI SIVATERKRE KLAAQLTWIA NKHELGLPED 
RRHDRLTPKQ PRTELVFDDG RKYSCRIMDL SLSGAAIDID IRPPLGTAVR LGSMRGRVVR 
HFLEGVAIEF TTLQSREALT EFL