| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2179 |
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| Symbol | |
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| ID | 7387891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1792140 |
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| End bp | 1792994 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651372 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002549566 |
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| Protein GI | 222148609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCGC TGCTTCGCCG CCGCTCGATC CAGCTCCTGC TCTTGCTCCT GCCGGGGGTC
GGCTATCTGC TGTTCTTCTT CGGCCTGCCG CTGCTGTCGG CGCTGGTCGG CAGCTTCCGG
CTTGAAGATG GCAGCTTTAC GCTGAGCTGG TATCAGCGGA TCTTCACCCG GCCCTCCATG
CTGCGCGGCC TATCCACCTC AATCTATTAC GGTGTCATGC CGGTTCTGGT GTCGCTGGCG
CTCTCCGTGC CGCTGGCGCT TCTGCTGCGC AAAAGTTTTA TCGGGCGCAA GCTGTTCAGC
GGGCTTTACA AGCTGCCGAT GGCCGTTCCG AGCATTATCG TCGGTCTGAT GATCATCGTC
GTCTTCGAGC GCGGTGGCTT TTTCGACCGC CTGCTGGCCC CACTCGGCTT TACCCTGCCG
AAACTGGTCC GCGACGACCT GGGTGCTGGC GTCATCATCG CCAATTCCTG GAAGCAGATC
CCGTTCATGA CGCTGATCAT CACCAGCGCC TTTGCCGCCA TTCCCGAGGA TATCCGCTTT
GCCGCCCGCA CGCTTGGCGC ATCCCGGCTT CGGACATTTT TGGCTGTGGA CGTGCCGCTT
GCCATGCCGG GCATTACCGC CGCCATTCTC CTGACCTTCA TCGGCTCGAT GGGCTCCTAT
GCCATACCCG ATATTGTCGG CCCACCAACG GCGCGCCCAC TCTCTGTCCT GATGGTGCAG
GAGTTCAAAC AGGGACGGTT CGAGCAGGTC TATGCGATGG GCATGGTGCT CAGCCTGTTC
GCTGTCATCG TTCTCCTGAC CTATTATGCC CTGACCAGCC GGATCGGTGC TGGCAATGCG
CGAGGGAATG CGTGA
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| Protein sequence | MPSLLRRRSI QLLLLLLPGV GYLLFFFGLP LLSALVGSFR LEDGSFTLSW YQRIFTRPSM
LRGLSTSIYY GVMPVLVSLA LSVPLALLLR KSFIGRKLFS GLYKLPMAVP SIIVGLMIIV
VFERGGFFDR LLAPLGFTLP KLVRDDLGAG VIIANSWKQI PFMTLIITSA FAAIPEDIRF
AARTLGASRL RTFLAVDVPL AMPGITAAIL LTFIGSMGSY AIPDIVGPPT ARPLSVLMVQ
EFKQGRFEQV YAMGMVLSLF AVIVLLTYYA LTSRIGAGNA RGNA
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