| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2123 |
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| Symbol | lipA |
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| ID | 7387845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1740045 |
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| End bp | 1741016 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651325 |
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| Product | lipoyl synthase |
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| Protein accession | YP_002549520 |
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| Protein GI | 222148563 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.669561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACCA TCCTCGATAG AACCAAGCCG GACGACAAGC GCATCCGCCA CCCGGAAAAG
GCTCACAAGC CGGATACCGA AGTGCTGCGC AAGCCGGAAT GGATCAGGGT GAAGGCTCCG
ACCTCCAAGG GCTATCAGGA AACTCGCGAA CTGGTGCGCT CCCACAAGCT GGTCACCGTC
TGCGAAGAAG CCGGCTGCCC GAATATTGGC GAGTGCTGGG AAAAGAAGCA CGCCACCTTC
ATGATCATGG GTGAGATTTG CACCCGCGCC TGCGCCTTCT GCAATGTGGC GACCGGCAAG
CCGAATGCGC TTGACCGCGA AGAGCCTGCC AATGTGGCCA AGGCCGTGCG CCAGATGGGC
CTGTCGCATG TGGTCATCAC GTCCGTGGAC CGCGACGACC TGGCCGATGG CGGCGCTGAG
CATTTCGAAC AGGTAATCTG GGCGATCCGC GAAGCTTCGC CCGCTACGAC CATCGAAATC
CTGACCCCTG ACTTTTTGAA AAAGCCCGGC GCACTGGAGC GTGTCGTTGC TGCAAAGCCA
GACGTCTTCA ACCACAATAT GGAAACCGTT CCAGGCAATT ACCTTACCGT GCGTCCGGGC
GCCCGCTACT TCCACTCGGT GCGGCTGTTG CAGCGGGTCA AGGAACTCGA TCCGACAATG
TTCACCAAAT CCGGCATCAT GGTCGGCCTT GGCGAAGAGC GCAACGAAGT GCTGCAATTG
ATGGATGACC TGCGCACCGC AGACGTGGAT TTCCTGACCA TCGGCCAATA TCTCCAGCCG
ACCCGCAAGC ACCACAAGGT GGAACGCTTC GTGACGCCGG AAGAGTTCAA GTCCTATGAG
GATATCGCCT ATACCAAGGG CTTCCTGATG GTTGCTTCCA GCCCGCTCAC CCGCTCCTCC
CACCATGCCG GTGACGATTT TGCCCGGCTG AAGGCCAACC GCGAAAAGAA GCTGCTGGCG
GCTGCGGAGT AG
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| Protein sequence | MVTILDRTKP DDKRIRHPEK AHKPDTEVLR KPEWIRVKAP TSKGYQETRE LVRSHKLVTV
CEEAGCPNIG ECWEKKHATF MIMGEICTRA CAFCNVATGK PNALDREEPA NVAKAVRQMG
LSHVVITSVD RDDLADGGAE HFEQVIWAIR EASPATTIEI LTPDFLKKPG ALERVVAAKP
DVFNHNMETV PGNYLTVRPG ARYFHSVRLL QRVKELDPTM FTKSGIMVGL GEERNEVLQL
MDDLRTADVD FLTIGQYLQP TRKHHKVERF VTPEEFKSYE DIAYTKGFLM VASSPLTRSS
HHAGDDFARL KANREKKLLA AAE
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