| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2065 |
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| Symbol | |
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| ID | 7386876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1692137 |
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| End bp | 1692940 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651285 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002549480 |
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| Protein GI | 222148523 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGAC TTGCTTCCGC GCTCGACGCC TTCTGGGCGC TCGTTTCGCA GATTTTCGAT
CCCTTTTGCG GCAGCGCCGG GATCTTCACC TGGTTTGCAT CCGGGACACT TCTGGCCTGC
GGCGACGCGG GCTGGGGCGA CGAAATCGGT TTCGGCTTCA AGGTAACAGT CACGCTGGCC
GCAGCCACGC TGCCTTTCGG CCTGCTGATC GGCTTCCTGA TGGCCCTTGC CACCCAAAGC
AGCGAGCGCA TGCTGCGCCA GGCCGCAGCA ATCTACACGA CGATCTTTCG CGGCCTGCCC
GAACTCCTGA CGCTGTTCAT CGTCTATTAC GGCTCACAGA TCCTGATCCA AGCCGTCCTC
GCCTCCATGG GCTTTGAGGA GCGGATTGAA ATCAACGCCT TTTTCGCGGG CATGATCGCG
CTGGCCCTGG TGTTTTCCTC CTATTGCGCC GAGGTGCTGC AATCGGCCTT CCGGGCCATT
CCCTCCGGTC AATATGAGGC GGGCTTTGCC ATCGGCCTGT CGCGCACCAA AACCATGTTG
CTGGTGATCG TGCCTCAATT GATACGCATC GCCCTGCCCG GCATTGTCAA TCTTTGGATG
AACCTTTTGA AGGATACCGC GCTGGTCTCG GTCATCGGCC TTTCCGATAT TATCCGCCAG
ACCGGTATTG CCGCCCGTGT CACCAAGGAA GCCTTCCTGT TTTATACGAT TGCCTGTGCG
CTTTATCTGG TGCTGGCAAT CCTCTCCTCC ATCGCCGTCG GCTATATCGA AAACTGGACG
AAACAGTCGG GGGCGAACCG ATGA
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| Protein sequence | MGGLASALDA FWALVSQIFD PFCGSAGIFT WFASGTLLAC GDAGWGDEIG FGFKVTVTLA
AATLPFGLLI GFLMALATQS SERMLRQAAA IYTTIFRGLP ELLTLFIVYY GSQILIQAVL
ASMGFEERIE INAFFAGMIA LALVFSSYCA EVLQSAFRAI PSGQYEAGFA IGLSRTKTML
LVIVPQLIRI ALPGIVNLWM NLLKDTALVS VIGLSDIIRQ TGIAARVTKE AFLFYTIACA
LYLVLAILSS IAVGYIENWT KQSGANR
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