| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1865 |
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| Symbol | rpsM |
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| ID | 7386824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1544738 |
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| End bp | 1545106 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651148 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_002549345 |
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| Protein GI | 222148388 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCACGTA TCGCTGGCGT CAACATCCCA ACGGCAAAGC GCGTAGTTAT CGCGCTGACC
TATATTCATG GGATTGGTCC GAAGTTCGCA CAGGAAATCA TGGAAAAGGT TGGCCTTTCC
GCCGACCGCC GCGTTCATCA GCTGACAGAT GCTGAAGTTC TGGCTATCCG TGAAACCATC
GACCGCGATT ACCAGGTCGA AGGCGACCTG CGTCGCGACA CCGCAATGAA CATCAAGCGT
TTGATGGATC TGGGCTGCTA CCGCGGTCTT CGTCATCGTC GCGGTCTGCC TGTTCGCGGT
CAGCGTACAC ATACCAATGC TCGTACTCGC AAGGGTCCGG CAAAGGCTAT CGCTGGTAAG
AAGAAGTAA
|
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| Protein sequence | MARIAGVNIP TAKRVVIALT YIHGIGPKFA QEIMEKVGLS ADRRVHQLTD AEVLAIRETI
DRDYQVEGDL RRDTAMNIKR LMDLGCYRGL RHRRGLPVRG QRTHTNARTR KGPAKAIAGK
KK
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