Gene Avi_1786 details

Gene Information

• Locus tag: Avi_1786
• Symbol: aat
• ID: 7386767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 1489625
• End bp: 1490263
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643651087
• Product: leucyl/phenylalanyl-tRNA--protein transferase
• Protein accession: YP_002549288
• Protein GI: 222148331
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2360] Leu/Phe-tRNA-protein transferase
• TIGRFAM ID: [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.133839
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGCGGC GCAGCAGCAA GGATAGAAGT ATAACGCCCG ATATCCTGTT GCGCGCCTAT 
TCCATCGGCC TGTTTCCCAT GGCCGAATCC AGCGACGACC CGGAACTGTT CTGGGTCGAG 
CCGGACCTGC GGGGCATCAT TCCCCTCGAC AGCTTTCACT ATTCCAAAAG CCTCGCCAAG 
ATTATCCGGC AAAAGCCGTT TGATATCCGC TTCGATACGG CTTTTGCAGC GGTTCTGGAC 
AAATGCGCCG AGCCCGCACC GGACCGGCCC AGCACCTGGA TCAACCAGAC AATCCGCGAT 
CTATACACAG CCCTGTTTCA GATGGGCCAC GCCCATAGCG TCGAAGCCTT TGAAGGTGAT 
GAGCTGGTCG GCGGCCTTTA CGGCGTGTCC CTGGGGGCGG CCTTCTTCGG CGAAAGCATG 
TTTTCCCGCC GTTCCAACGC ATCGAAAATC TGTCTTGTGC ATCTGGTCGA AAGGCTACGG 
GCGCAGGGTT TCGTGCTTCT CGACACCCAG TTTACCACCG AGCATCTGAA AACCTTCGGG 
GCGATAGATG TGGCGAAAGA CGAGTACAGC AAGATGCTGG AAGAGGCCGT AACTATGGCC 
AATGTGCCGT TTTTATTGCC GGAAGAAATA AGTCCGTAA 

 

Protein sequence

MGRRSSKDRS ITPDILLRAY SIGLFPMAES SDDPELFWVE PDLRGIIPLD SFHYSKSLAK 
IIRQKPFDIR FDTAFAAVLD KCAEPAPDRP STWINQTIRD LYTALFQMGH AHSVEAFEGD 
ELVGGLYGVS LGAAFFGESM FSRRSNASKI CLVHLVERLR AQGFVLLDTQ FTTEHLKTFG 
AIDVAKDEYS KMLEEAVTMA NVPFLLPEEI SP