| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1763 |
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| Symbol | acd |
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| ID | 7386750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1475853 |
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| End bp | 1477496 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643651070 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_002549271 |
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| Protein GI | 222148314 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTA CGGAAGACAA ATTGCTGGAA CTCAATCAGC CAAGGCCCTG GTCCGGCGTG
AACGCCTTTC GCACCGATCC GCTGGTGGTT GATATTACCA ACGGCCTCAG CCGCAACCTG
CGCGATGAAT ATGATACGCT GGGCCGCTAT GTGACCTCGC ATGAGGCGCA GGAACTGGCC
CGCATGGCCA ACCACAATCC GCCGGAACTG CGCACTCACG GGCCACGCGG CGAGCGGCTG
GATGTGGTGG AGTTTCATCC GGCCTGGCAC GCGCTGATGC GCCGTTCCAT GGCAACCGGC
CTGCATTCCT CCGTCTGGGA AAATTTAGCG GATGCACGCG GCCAGGACCA CAAGGCCCGC
GCCGTGCGAT TCTATCTCAC CGCCCAGCTT GAATGCGGCC ATCTCTGCCC GCTGACCATG
ACCAGCGCCT CGGTCGCCGC CCTGATGGGC TCGCCCCGAG TGCAGAAGGA ATGGGCGCCG
AAGATTCTCT CGCGCAAATA TGACAGTTCC AACCGCCCCG CCATGCAGAA ATCGGCCATT
ACCATTGGCA TGGGCATGAC GGAGAAACAG GGCGGCACCG ATGTGCGCGC CAATATCTCC
ACCGCCACAC GGGTAGGCGA GGGGATCTAC CGGCTCTCCG GCCACAAATG GTTCATGTCG
GCACCGATGA GCGATGGGTT CGTTATGCTG GCGCAGATGC CGGAGGGTGT TGGTTGTTTC
CTGGTGCCGC GCCTGTTGGA AGACGGTTCG GCCAATGGTT TGCAGTTCCA GCGGCTGAAG
GACAAGATCG GCAATCGCTC CAATGCCTCC TCCGAGGTCG AATTTACCGA TGCCTTCGGC
TTTTTGCTGG GCGAGCAGGG CGGCGGCATC CGCACCATCC TGGAAATGGT AACCCTGACC
CGGCTCGATT GCGCACTTGC GTCCGCTGGC ATCATGCGCG CTTCGATGGC CGAGGCTGTC
CACCATGTGC GGGGCCGCTC GGTGTTCGGC AAGAAGTTGG TGGACCAGCC GATCATGACC
CGCGTTCTGG CCGATATGGC GCTGGATGTG GCGGCGGCCA CGGCGCTGTC CTTCCGGCTG
GCCGAGGCTT TCGACCGTGC TCGTGACAAT CCCGCCGATG CGGCTTACGC ACGGGTGATG
ACGCCGGTGG TGAAATACTG GGTCTGCAAA ATGGCGCCGC CGCTGATCTA TGAAGCGATG
GAATGCATCG GCGGCAGCGG CTATGTGGAA GAACGCGCCA TTGCCCGCCA TTACCGCGAG
GCCCCTGTTA ACGCCATCTG GGAAGGCTCC GGCAATGTCA TGGCGCTGGA CGTGCTGCGC
GTGCTGGCCC GTGGCAAGGA TCTGTTCGAA ATGGTGTTTG CCGAGCTGGA ACGCGATCTC
GGCCCGTCAG GCCGCAAGAC CGTCGAAGTG CTGCGCGCCG CCATGGCGCT CTGCGAACGC
GACGAGGGTG CGGCCCGCCT GCTGGTCGAG CAAATGGCAC TGGCCGCCGC CGCCGCCGAG
CTTTACCGCA TGGGGGCGGG CAAGATCGCC GATGCCTTTC TTGAGACACG CCTGACAGGC
GGCTGGCGAA ATACCTACGG CGTGCTGGAT GCCCGATTCG ACAGTCGGTA TCTGATTGAT
TTGCTGTATC CGGCGGTGGA TTGA
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| Protein sequence | MSRTEDKLLE LNQPRPWSGV NAFRTDPLVV DITNGLSRNL RDEYDTLGRY VTSHEAQELA
RMANHNPPEL RTHGPRGERL DVVEFHPAWH ALMRRSMATG LHSSVWENLA DARGQDHKAR
AVRFYLTAQL ECGHLCPLTM TSASVAALMG SPRVQKEWAP KILSRKYDSS NRPAMQKSAI
TIGMGMTEKQ GGTDVRANIS TATRVGEGIY RLSGHKWFMS APMSDGFVML AQMPEGVGCF
LVPRLLEDGS ANGLQFQRLK DKIGNRSNAS SEVEFTDAFG FLLGEQGGGI RTILEMVTLT
RLDCALASAG IMRASMAEAV HHVRGRSVFG KKLVDQPIMT RVLADMALDV AAATALSFRL
AEAFDRARDN PADAAYARVM TPVVKYWVCK MAPPLIYEAM ECIGGSGYVE ERAIARHYRE
APVNAIWEGS GNVMALDVLR VLARGKDLFE MVFAELERDL GPSGRKTVEV LRAAMALCER
DEGAARLLVE QMALAAAAAE LYRMGAGKIA DAFLETRLTG GWRNTYGVLD ARFDSRYLID
LLYPAVD
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