Gene Avi_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1637 
Symbol 
ID7387425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1368272 
End bp1368796 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID643650974 
Productintegrase 
Protein accessionYP_002549179 
Protein GI222148222 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGAT GCCGCCGCAT GGAGATCTTG GGGCTGGAGT GGCCGCATGT CGATTTCTTT 
TCCCGCCGCT TTGTCGTGAC CGGCAAGGGC GACAAATCCC GCACCATCCC AATGTCCGAC 
GCGATCTATG ATTTGCTGTG GTCGCTCAAA GACCACCACC CTACAAAGGT GTTCACCTAT 
CAGGCCCTCA AAGCCCGCAA GGATCTGTGC CTGGAGCGCG GCAAACGATA CCCGATGACC 
GAGGCCGGTT TAAAAACCGC CATGCGCCGG GCGGTGCCAA ATGCGGGCGT GGAAAACTTC 
CGTTTCCACG ACACGCGCTA CACAGCGGCG ACCCGTGTGC TGCGCGCGTC AAACCTCCGC 
GTTGCCCAAA AGCTACTTGG ACATCAGGAC ATTGCGACGA CCACAAAGTA CGCCCACGCC 
ATGGACGACG ACATCAGAGC CGCCCTCAAT TCCGCGACGG CAAAGCCCAA GGCGACAGCC 
ACATCAGATG ATAACGATCT GAAAAATTTG CAGATTATTG ACTGA
 
Protein sequence
MTGCRRMEIL GLEWPHVDFF SRRFVVTGKG DKSRTIPMSD AIYDLLWSLK DHHPTKVFTY 
QALKARKDLC LERGKRYPMT EAGLKTAMRR AVPNAGVENF RFHDTRYTAA TRVLRASNLR 
VAQKLLGHQD IATTTKYAHA MDDDIRAALN SATAKPKATA TSDDNDLKNL QIID