| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1500 |
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| Symbol | cvpA |
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| ID | 7386466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1258637 |
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| End bp | 1259236 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650874 |
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| Product | colicin V production protein |
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| Protein accession | YP_002549079 |
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| Protein GI | 222148122 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.140169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCATTA CGATTTTCGA CGGTATTGTC ATCGGTGTCG TGCTGTTTTC AGCCGTGCTG
GCGATGATCC GCGGCTTTTC ACGCGAGATC CTGTCGATTG CCAGTTGGGT GGGCGCCATT
GCGGCGGCCT ATTATCTTTA TCCTTTCATT CTTCCCTATG TGAAGAATTA TACCAACGAC
CAGCGGATCG CCGTTGCCGC CTCTGCAGGC GGGGTATTCC TGCTGGCCCT GATCCTGATC
TCGTTTATCA CCTCGCGCAT TGCCGACTTC ATCATCGACA GCCGGATCGG CGCATTGGAC
CGTACCCTCG GCTTTCTGTT CGGAGCGGCG CGCGGCATCC TGCTGCTGGT TGTGGCCGTC
GCCTTCTGGA ACTGGCTGAT CGATGCCAAG CAGCGGCCGG ACTGGGTCAA CAACGCCAAG
TCGAAACCGT TCCTCGATGC GCTGGTAGTC AAGCTGGAAG CGGTGCTGCC CGACGATATC
GAACCGCAAC TGCGCGCCCG CATCCTCGGC AAACAACAGA CAGCACCTGC TGAAGGCCAG
GCGCCTGCAG ACGATGCGCC AGCCCAGACA CCAGGTCAGA CACCCGCGCC AGCCAATTGA
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| Protein sequence | MPITIFDGIV IGVVLFSAVL AMIRGFSREI LSIASWVGAI AAAYYLYPFI LPYVKNYTND
QRIAVAASAG GVFLLALILI SFITSRIADF IIDSRIGALD RTLGFLFGAA RGILLLVVAV
AFWNWLIDAK QRPDWVNNAK SKPFLDALVV KLEAVLPDDI EPQLRARILG KQQTAPAEGQ
APADDAPAQT PGQTPAPAN
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