| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1487 |
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| Symbol | cysS |
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| ID | 7386456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1245504 |
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| End bp | 1247270 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643650864 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_002549069 |
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| Protein GI | 222148112 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCATTATC TGCTGGATCA TTATTCGCTA GCGCATTCGC TGGCCCGGCC GTTTTCGTCT
CTTGTAAAAG TCCTAGATGA CAAACGCTTC GGTCCAGCCG GGTTTATACA CGTCTGGGAG
ACTGACATGG CCGAGGGCCT CAAGCTTTAC AACACACTGA CGCGCAGCAA GGTTGATTTC
ACCCCAATCG ACCCCAAAAA CGTGCGCATG TATGTCTGCG GCCCAACGGT TTATGATTTT
GCCCATATCG GCAACGCCCG GCCCGTGATT GTGTTTGATG TGCTCTACCG GCTGCTGCGT
CACATCTATG GCGAAAACCA CGTCACCTAT GCCCGCAACA TCACCGATGT CGATGACAAG
ATCAATGCGC GGGCGCTCCG GGACTTTCCC GATCTGCCGC TGAATGAGGC GATTGCCAAG
GTGACGCAAA AGACGGCGGA TCAGTTCCAC GCCGATGTGG CCGCACTGGG TAACTTGCCG
CCGACCATCG AGCCGCGCGC CACCGACAAT ATCCAGCAGA TGATTGACAT CATCAAGACG
CTGATTGCCA AGGGCCATGC CTATGTGGCC GAGGGCGAAG TGCTGTTTGA CACGCGGTCC
ATGGCCGCTT ACGGCCAGCT TTCCAAGCGC AATCTGGATG AGCAACAGGC AGGCGCACGC
ATCGCTGTCG AGGCCCATAA AAAGCACCCC GGCGACTTTG TGCTATGGAA GCTCTCAAGC
CATAACGAAC CCGGCTGGGA AAGCCCCTGG GGCCGAGGCC GTCCGGGCTG GCATATCGAA
TGCTCGGCAA TGTCGAAGCG CTATCTGGGC GAGGTTTTCG ACATTCACGG CGGCGGACTG
GACCTGATTT TCCCCCACCA CGAAAACGAA ATTGCCCAAT CCTGCTGCGC CAACGACACC
AGCGTGATGG CCAATGTGTG GATGCACAAT GGCTTCGTGC AGGTGGAAGG CCGCAAGATG
TCCAAGTCGG ACGGCAATTT TCTTACAATA GATCAACTGC TTCGTTCAGA TAGCTTCGGT
GGCCGACCAT GGCACGGTGG TGTTTTTCGT TTTGCCATGC TCAAGACGCA TTACCGGCAG
CCGATAGACT GGACACTCGA CAAATTGCAG CAATCCAGAA ATGAGATTTT TTCTTTTATT
GCAAGTTGCA ATGCTGGTTT GATCATAAGC CAAATCAACG CCAAAAGATC TTTAGGTAAG
GCTACAGAAC AAGACGCCGA TTTCATTAAA GCCCTCTGCG ACGACCTTAA TACACCGCTT
GCGCTTTCAA TTTTATTTGG GCTGAGAGAG AACGCAAAAA GCGATAGCAA CGCAGCAGAA
AAGATGTTCT TGGCCTTGGA ATTCCTTGGT ATTTTGGACC TCTCAAAATG GGCCCTCTAC
GATAGCGTGT ATCTGCATGA CACGAACATA AAAGGCCAAT TGCTAGGACA TGATGACCTT
GATCGCGTTG AACGGCTTCG CGTTGCCCTT ACAAATGGTG ACGAAAAGCA AGCGAAAAAA
ATCAAAGGGG AAATCGAGTC TTGGGGTGTG CAGGTCAACG CTAAAAGAAA CGGTGAAATT
AGCCTAGAGC TAAAAAATGG CGAGACCAAT GATCTATCTG CCGCTATCGA CGCCCTTGTC
GAGATGCGCC TTGAAATGCT GAAGACCAAG AACTTTGCCG AGGCCGACAA GATCCGCGAC
GATCTTTTGG CAAAGGGCAT TCAGCTCAAG GACGGCAAGG ATAAGGACAC CGGCGAGCGC
GTGACCACGT GGGAGGTCAA GCGGTAG
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| Protein sequence | MHYLLDHYSL AHSLARPFSS LVKVLDDKRF GPAGFIHVWE TDMAEGLKLY NTLTRSKVDF
TPIDPKNVRM YVCGPTVYDF AHIGNARPVI VFDVLYRLLR HIYGENHVTY ARNITDVDDK
INARALRDFP DLPLNEAIAK VTQKTADQFH ADVAALGNLP PTIEPRATDN IQQMIDIIKT
LIAKGHAYVA EGEVLFDTRS MAAYGQLSKR NLDEQQAGAR IAVEAHKKHP GDFVLWKLSS
HNEPGWESPW GRGRPGWHIE CSAMSKRYLG EVFDIHGGGL DLIFPHHENE IAQSCCANDT
SVMANVWMHN GFVQVEGRKM SKSDGNFLTI DQLLRSDSFG GRPWHGGVFR FAMLKTHYRQ
PIDWTLDKLQ QSRNEIFSFI ASCNAGLIIS QINAKRSLGK ATEQDADFIK ALCDDLNTPL
ALSILFGLRE NAKSDSNAAE KMFLALEFLG ILDLSKWALY DSVYLHDTNI KGQLLGHDDL
DRVERLRVAL TNGDEKQAKK IKGEIESWGV QVNAKRNGEI SLELKNGETN DLSAAIDALV
EMRLEMLKTK NFAEADKIRD DLLAKGIQLK DGKDKDTGER VTTWEVKR
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