Gene Avi_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1483 
Symbol 
ID7386452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1243735 
End bp1244223 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID643650860 
Producthypothetical protein 
Protein accessionYP_002549065 
Protein GI222148108 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.398107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA CAATCCACAC CGGCGGTTGC CAATGCGGAG CCATCCGGTT TCGCGTCAGA 
GGCGTTCTGA AAGACTCATC CATCTGCCAT TGCCGCATGT GCCAGAAGGC GTTCGGAGCC
TATTATGCGC CGCTGGTTTC GGTGCGCGGG GTCGATTTTC AGTGGACACG GGGCGCGCGC
AAGATGTTCC GCTCCAGCAA TGTCGTGTCG CGCGGCTTTT GTGGCGATTG TGGCACGCCG
CTGACCTATG AGGCCCCGGA TGGCATGGCG GTTGCGGCAG GCGCTTTCGA TGATCCATCC
ATCCTGCCCC CGGTGCAGCA GTTCGGGACA GAAGGGAAAA TAGGCTTCGT CGATCACCTG
CATGAATTGC CAGGCAATCC GACAGAAGAA GACCTTGATG AGTTTCCGTT CCTAGACGGC
CTCGTCTCCT ACCAGCACCC CGACCACGAC ACCGAAACCT GGCCAACCGA AAGCGGAGCA
AAGCCATGA
 
Protein sequence
MAETIHTGGC QCGAIRFRVR GVLKDSSICH CRMCQKAFGA YYAPLVSVRG VDFQWTRGAR 
KMFRSSNVVS RGFCGDCGTP LTYEAPDGMA VAAGAFDDPS ILPPVQQFGT EGKIGFVDHL
HELPGNPTEE DLDEFPFLDG LVSYQHPDHD TETWPTESGA KP