Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1483 |
Symbol | |
ID | 7386452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1243735 |
End bp | 1244223 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650860 |
Product | hypothetical protein |
Protein accession | YP_002549065 |
Protein GI | 222148108 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.398107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGA CAATCCACAC CGGCGGTTGC CAATGCGGAG CCATCCGGTT TCGCGTCAGA GGCGTTCTGA AAGACTCATC CATCTGCCAT TGCCGCATGT GCCAGAAGGC GTTCGGAGCC TATTATGCGC CGCTGGTTTC GGTGCGCGGG GTCGATTTTC AGTGGACACG GGGCGCGCGC AAGATGTTCC GCTCCAGCAA TGTCGTGTCG CGCGGCTTTT GTGGCGATTG TGGCACGCCG CTGACCTATG AGGCCCCGGA TGGCATGGCG GTTGCGGCAG GCGCTTTCGA TGATCCATCC ATCCTGCCCC CGGTGCAGCA GTTCGGGACA GAAGGGAAAA TAGGCTTCGT CGATCACCTG CATGAATTGC CAGGCAATCC GACAGAAGAA GACCTTGATG AGTTTCCGTT CCTAGACGGC CTCGTCTCCT ACCAGCACCC CGACCACGAC ACCGAAACCT GGCCAACCGA AAGCGGAGCA AAGCCATGA
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Protein sequence | MAETIHTGGC QCGAIRFRVR GVLKDSSICH CRMCQKAFGA YYAPLVSVRG VDFQWTRGAR KMFRSSNVVS RGFCGDCGTP LTYEAPDGMA VAAGAFDDPS ILPPVQQFGT EGKIGFVDHL HELPGNPTEE DLDEFPFLDG LVSYQHPDHD TETWPTESGA KP
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