Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1482 |
Symbol | |
ID | 7386451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1243271 |
End bp | 1243738 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650859 |
Product | hypothetical protein |
Protein accession | YP_002549064 |
Protein GI | 222148107 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0982855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA TTTTTTCCGG CGGCTGCCAA TGTGGTGCTG TGCGGTTTCA GGCGGCCAAG CTGGGGCGGC CTTCCATCTG TCATTGCCGC ATGTGCCAAA AGCAATTCGG TGGGTTTTTT GGCGCTTTTG TCTCCGCTGA TCAGGCGCAT CTGACATGGA CACGTGGCCA GCCGAAATTG TTTCGCTCTT CGAGCAAGGT CAAGCGTGGC TTTTGCGAAA AATGCGGCAC ACCGCTGACC TACCAACACC CCACCGGAGT TGAGATTGCC ATCGGTGCGT TTGACAATCC CGCCGCCTTT GAGCCTGCCA TTCAGGTCAA TCACCACAAG CGCCTGCCAT GGATCGACAC GCTGTTTGAA ACGCCGATCT ATACCAGCCC GGAATACGAA GCCTTCTTCG ACTCCATCGA ATCCTGGCAG CACCCGGATT TCGACACCCA AGTCTGGCCG GTGGAGGATG AGGCATGA
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Protein sequence | MSEIFSGGCQ CGAVRFQAAK LGRPSICHCR MCQKQFGGFF GAFVSADQAH LTWTRGQPKL FRSSSKVKRG FCEKCGTPLT YQHPTGVEIA IGAFDNPAAF EPAIQVNHHK RLPWIDTLFE TPIYTSPEYE AFFDSIESWQ HPDFDTQVWP VEDEA
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