Gene Avi_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1482 
Symbol 
ID7386451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1243271 
End bp1243738 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content56% 
IMG OID643650859 
Producthypothetical protein 
Protein accessionYP_002549064 
Protein GI222148107 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0982855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA TTTTTTCCGG CGGCTGCCAA TGTGGTGCTG TGCGGTTTCA GGCGGCCAAG 
CTGGGGCGGC CTTCCATCTG TCATTGCCGC ATGTGCCAAA AGCAATTCGG TGGGTTTTTT
GGCGCTTTTG TCTCCGCTGA TCAGGCGCAT CTGACATGGA CACGTGGCCA GCCGAAATTG
TTTCGCTCTT CGAGCAAGGT CAAGCGTGGC TTTTGCGAAA AATGCGGCAC ACCGCTGACC
TACCAACACC CCACCGGAGT TGAGATTGCC ATCGGTGCGT TTGACAATCC CGCCGCCTTT
GAGCCTGCCA TTCAGGTCAA TCACCACAAG CGCCTGCCAT GGATCGACAC GCTGTTTGAA
ACGCCGATCT ATACCAGCCC GGAATACGAA GCCTTCTTCG ACTCCATCGA ATCCTGGCAG
CACCCGGATT TCGACACCCA AGTCTGGCCG GTGGAGGATG AGGCATGA
 
Protein sequence
MSEIFSGGCQ CGAVRFQAAK LGRPSICHCR MCQKQFGGFF GAFVSADQAH LTWTRGQPKL 
FRSSSKVKRG FCEKCGTPLT YQHPTGVEIA IGAFDNPAAF EPAIQVNHHK RLPWIDTLFE
TPIYTSPEYE AFFDSIESWQ HPDFDTQVWP VEDEA