| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1391 |
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| Symbol | |
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| ID | 7389120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1169046 |
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| End bp | 1169831 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650791 |
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| Product | NAD/NADP dependent oxidoreductase |
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| Protein accession | YP_002548997 |
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| Protein GI | 222148040 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCTTG GCATTTCCGG CAAGCGGGCG GTTGTTCTCG CCGCATCCCG CGGACTTGGG
CAAGGCATCG CCAATGCACT GGCCGCCGAA GGCGCGCATG TGCTGATCTG CGGACGCACA
AAAGACAAGC TCGAGGCCAA TTGCGCTGAC ATCGTCAAGG CTGGCGGCAA GGCGGATTAT
GTAGTGGCGG ATCTCTCGGA TACTAACTTT GTCGCCACGC TCGTTGAAGC CATCGCCACA
AAACTTGGCG GCATCGATAT CCTCGTCAAC AATACCGGCG GGCCGACACC CGGCACCGTG
GAAGACATGG ACGATGAAAA GCTCCACACC TTTTTTCAGT CCATGGTGGT GCGGATCATT
ACGCTGACCA ACGCGCTGGT TCCCCAGATG AAGGCGCAGG GCTTCGGACG GATTCTCACC
GTTGCTTCGT CTGGCGTGAT TGAGCCAATC GCCAATCTGG CACTCTCCAA CACGTTGCGC
GGCGCGTTGG TCGGCTGGAA CAAGACGCTG TCTTCCGAAA TAGCCTCCTT CGGCATCACC
GCCAATCTTC TCCTGCCCGG AAGGATCCAT ACCGACCGGA TTGATGAACT GGACGGCGCC
AATGCCAAAC GCCAAGGTAA AACGCTGGAA GAGGTTCGCG AAAGCTCGAT CAAAACCATC
CCGATAGGAC GGCTTGGCAA GGTGGAAGAA TTTGCCGCCG CAGGTGCTTT TCTCTGCTCG
GTCCCTGCCG CATACATCAC CGGCACAATG CTGCGGGTCG ATGGCGGCGC CGCCAAATCT
CTTTGA
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| Protein sequence | MDLGISGKRA VVLAASRGLG QGIANALAAE GAHVLICGRT KDKLEANCAD IVKAGGKADY
VVADLSDTNF VATLVEAIAT KLGGIDILVN NTGGPTPGTV EDMDDEKLHT FFQSMVVRII
TLTNALVPQM KAQGFGRILT VASSGVIEPI ANLALSNTLR GALVGWNKTL SSEIASFGIT
ANLLLPGRIH TDRIDELDGA NAKRQGKTLE EVRESSIKTI PIGRLGKVEE FAAAGAFLCS
VPAAYITGTM LRVDGGAAKS L
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