Gene Avi_1363 details

Gene Information

• Locus tag: Avi_1363
• Symbol: cycJ
• ID: 7389102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1139783
• End bp: 1140232
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650773
• Product: cytochrome c-type biogenesis protein CcmE
• Protein accession: YP_002548979
• Protein GI: 222148022
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2332] Cytochrome c-type biogenesis protein CcmE

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGAA AGCAGAAACG TCTGGCCGTC ATCGCCGGGG GCGTCGGTTT CATCATGGTG 
GCCGTGTTGC TGGTTCTGTT CGCTTTCGGC CAGTCTATCG CCTATTTTTA CATGCCATCG 
GATCTCGCCA AGACGCCGGT TGGTCCTGGC ACCCGCATCC GGCTGGGCGG ACTGGTGGCT 
GAAGGCTCGG TCAAGCGCGA CACCGGCTCC ACTGTCAGTT TTGCCGTGAC CGATGGCACG 
GCCACGGTGC CGGTGACCTA TACCGGCATT CTGCCGGATC TGTTTCGTGA AGGGCAGGGC 
GTGGTGACGG AAGGTGTGTT TGGCGCTGGC GGCACGCTGT TTGATGCCGA TACGGTTCTG 
GCCAAGCACG ACGAGAATTA CATGCCGAAG GAAGTTGCCG ACCGGATGAA GAAGGACGGC 
GTCTGGAAGG GTGAGGGAGA GGCGAAATGA 

 

Protein sequence

MTRKQKRLAV IAGGVGFIMV AVLLVLFAFG QSIAYFYMPS DLAKTPVGPG TRIRLGGLVA 
EGSVKRDTGS TVSFAVTDGT ATVPVTYTGI LPDLFREGQG VVTEGVFGAG GTLFDADTVL 
AKHDENYMPK EVADRMKKDG VWKGEGEAK