Gene Avi_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1324 
Symbol 
ID7389072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1112202 
End bp1112681 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID643650744 
Producthypothetical protein 
Protein accessionYP_002548950 
Protein GI222147993 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCG AACCCTATTG GAAGACCAAG CGCCTTGATG AGATGAACAC TGTGGAGTGG 
GAAGCCCTCT GCGACGGCTG TGGCCTGTGC TGTCTCAACA AGCTGGAGGA CTGGGAAAGC
GGTGAGGTGG TCTTCACCTC CGTTGCCTGT CGTCTGCTGG ATGGGGAAAG CTGTCGGTGC
AAGGACTATC CCAACCGGCA GGCCACCGTG CCCGATTGTA TCCAACTGAC GCCAGATCAG
GTCGAGGACA TCGCTTGGCT GCCGCCCAGC TGCGGCTACC GGCTGGTGCA TGAGGGGCGC
GACCTTTACT GGTGGCATCC GCTGGTTTCG GGCGACCCTG AAACCGTCCA TCAGGCCGGG
ATTTCCGCCC GGGGCCGCAC GGTCAGCGAA GAGCATGTTT CTGTCGAGGA TTTCGAGGAT
TATCTCTGTG ACTGGCCTAT GACGGTGCTT TTGCAGGCCG AAGAATCTGG CGACCAATAG
 
Protein sequence
MTSEPYWKTK RLDEMNTVEW EALCDGCGLC CLNKLEDWES GEVVFTSVAC RLLDGESCRC 
KDYPNRQATV PDCIQLTPDQ VEDIAWLPPS CGYRLVHEGR DLYWWHPLVS GDPETVHQAG
ISARGRTVSE EHVSVEDFED YLCDWPMTVL LQAEESGDQ