Gene Avi_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1251 
SymbolilvE 
ID7387631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1053183 
End bp1054064 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content62% 
IMG OID643650692 
Productaminotransferase 
Protein accessionYP_002548898 
Protein GI222147941 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCG ATACCACCCC GCGTACCCCC ACCTGGACCT ATGTCGATGG CGAATGGCTG 
TCGGGCAACC CGCCACTGAT CGGGCCGACA TCACATGCCA TGTGGCTGGG CTCGACGGTG
TTTGACGGGG CGCGCTGGTT CGACGGGATC GCGCCTGACC TCGACCTGCA TTGCCAGCGG
ATCAACCGTT CGGCTTTGGC CATGCATATG CAACCGACCA TGAGTGCCGA GGAAATCGAG
CGGCTGGCGC GTGAAGGCGT GACCAGGTTC GATGGCAAGA CGGCGATCTA TATCAAGCCG
ATGTATTGGG CTGAACATGG CGCGCCGGGC TCGGTCGTGG CACCCGATGC CGCCTCCACC
CGCTTTGCGC TCTGCCTGTT CGAAGCGCCG ATGCACACCG CCACGCCGCA CACGCTGACC
GTGTCTCCCT TCCGTCGCCC CTCGCCGGAA TGCGCGATGA CCGATGCCAA GGCCGGCAGC
CTCTATCCCA ATTCCGGCCG GATGATTCTT GAGGCGCGCG CCCGTGGTTT TGATAATGCG
CTGGCGCTGG ACATGAATGG CAATGTGGCG GAAACCGCCT CTTCCAATAT CTTCATGGTC
AAGGACGGCG TGGTGTTCAC CCCGATCCCC AACCGCACCT TTCTGGCGGG CATCACCCGG
TCGCGCGTCA TCACCCTGCT GCGCCAGGCA GGCTTCGATG TGCAGGAAGT CACGCTCAGC
GTCACCGATT TCCTCGGTGC CGATGAAGTA TTCACCAGCG GCAATTATTC GAAGATCGCC
CCGGTTTCGA GGCTTGACGG CCGCGATTAC CAGGAAGGCC CCGTGACCCG CAAGGCACTG
GATCTGTATA TGGACTGGGC GCGGTCGGGC AGCGATCTTT AA
 
Protein sequence
MTVDTTPRTP TWTYVDGEWL SGNPPLIGPT SHAMWLGSTV FDGARWFDGI APDLDLHCQR 
INRSALAMHM QPTMSAEEIE RLAREGVTRF DGKTAIYIKP MYWAEHGAPG SVVAPDAAST
RFALCLFEAP MHTATPHTLT VSPFRRPSPE CAMTDAKAGS LYPNSGRMIL EARARGFDNA
LALDMNGNVA ETASSNIFMV KDGVVFTPIP NRTFLAGITR SRVITLLRQA GFDVQEVTLS
VTDFLGADEV FTSGNYSKIA PVSRLDGRDY QEGPVTRKAL DLYMDWARSG SDL