Gene Avi_1248 details

Gene Information

• Locus tag: Avi_1248
• ID: 7387629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1051251
• End bp: 1052051
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643650690
• Product: hypothetical protein
• Protein accession: YP_002548896
• Protein GI: 222147939

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCAGAA ATTTCTGTGC GGCTCGTGGT CTGAATTTCC AGCCGCCCTA TCTCGTTTCC 
ATAATGCCGG TGCTTTTTGC GAGGGGAGAT TTCAGCGTGA ACAAGATTAT TAAACTTGTT 
GGGGCTTTTC TTTTTGTGTT CGGACTTGCC TTTGTCGCAA CTGGCGCTGG CATAGCCTAT 
TTTGACCGCC AGTTTTATGC CAGCGGGTCA AAAGCGAAAG GAGTGGTGGT TGATCTTGCG 
CGCAAAAGCG ACAATGACCA TGATGGAACA ACCTATGCGG CCATTGTCCG TTTTACCGAT 
GCCCGTGGCC AGCAACAGGA AATGGCCGAT CACGTGAGCT CCAATCCGCC GCGTTTTTCA 
CGCGGCGACA CGGTCGATGT GTATTACGAT CCACAATCGC CATCCAATGC GCGGATTGAC 
GATGCCTTTG GGCGATATTT TTTACCTGGA ATGTTTGCAG GCATGGGTAC CCTGTTCGCC 
GTGATTGGCG GCGCCATCAT TGTTGTCGTG TTCTTGCAAA AACGTCGCAA CACCTGGCTG 
ATGCGGTTCG GTCGGCCGGT CGACGCTGAC TTTCTGCATG TGTTTCTCGA TCAAGGCATT 
GAGATCAACG GAGCTAACCC GTTCCGGGTC GTCGCGCAAG GGCCAGATCC CGTCAACGGT 
ACGTTGAGGC GATACCAGAG CGGTCCAATC TGGGTTGATC CATCCGCACA GCTTCAGGGC 
CGAAAGCTGC GGGTGCTGGT TGATCCGAGC AAGCCCGAAC GTCATATGAT TGACCTTGCG 
GGTGTGGTCA ACGATCCCTG A 

 

Protein sequence

MRRNFCAARG LNFQPPYLVS IMPVLFARGD FSVNKIIKLV GAFLFVFGLA FVATGAGIAY 
FDRQFYASGS KAKGVVVDLA RKSDNDHDGT TYAAIVRFTD ARGQQQEMAD HVSSNPPRFS 
RGDTVDVYYD PQSPSNARID DAFGRYFLPG MFAGMGTLFA VIGGAIIVVV FLQKRRNTWL 
MRFGRPVDAD FLHVFLDQGI EINGANPFRV VAQGPDPVNG TLRRYQSGPI WVDPSAQLQG 
RKLRVLVDPS KPERHMIDLA GVVNDP