| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1112 |
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| Symbol | thrH |
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| ID | 7386187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 939407 |
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| End bp | 940078 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643650591 |
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| Product | phosphoserine phosphatase |
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| Protein accession | YP_002548799 |
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| Protein GI | 222147842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR02137] phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGCAT CCATCTGTTC CTTCATCGAT CTCGAAGGCG TTCTCGTTCC GGAAATGTGG
CCGCATATCG CCAAGTCGTT CGGAATTCCC GAACTCCAGG CGACCACGCG GGAAATTCCC
GATTACCGTC AATTGCTGGA TCAGCGGATA AAACACCTGT CCGATCACCA CGTTACCCTG
GCCGAAATCT GCGCCAGTGT CGCGGAACTC GATCTGTTCA ATGGGGCGGT GGAATTCCTC
GCAGCGCTCA AGCTGCGTGG GCGTGTGGTG ATCGTCTCGG ATTCCTTCAG CCCGATGAAC
CGGCATTTTA TCGAGCAGAT CGCTGCTGAT CAGGTCCTCT GTCACAGTTT TCAGACCAAT
GACGAGGATA TCGTCACCGG CTTCGACTTC TGGAATGGGC TGGCTGGAAA ACATCTCTGT
TTCGACGCCG TCGATACCGA GGGCTGCGCC CATTTTGCAA TGGGCGACGC GTTGAACGAC
ATTTCAATGA TCCGTGCGGC GACCTATGGC GTGCTGTTTC AGCCCTCGAT GGCGACGCTG
CTGGCCGCGC CGGATCTGCG GGCTACATCA TCCTATAGTG AAGTCCTCGA TATCCTCGAT
GAAGCCATTT ATATCAATAG CAGATCGGCC TCAAAGAGGG CCACGACTTT CCTGGGGAGC
GCTTTCGGCT GA
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| Protein sequence | MTASICSFID LEGVLVPEMW PHIAKSFGIP ELQATTREIP DYRQLLDQRI KHLSDHHVTL
AEICASVAEL DLFNGAVEFL AALKLRGRVV IVSDSFSPMN RHFIEQIAAD QVLCHSFQTN
DEDIVTGFDF WNGLAGKHLC FDAVDTEGCA HFAMGDALND ISMIRAATYG VLFQPSMATL
LAAPDLRATS SYSEVLDILD EAIYINSRSA SKRATTFLGS AFG
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