| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1093 |
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| Symbol | |
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| ID | 7386173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 922739 |
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| End bp | 923422 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650578 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548786 |
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| Protein GI | 222147829 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1651] Protein-disulfide isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.317381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGAATT CAGAACTGAC CCTGACCAAG CGCCATCTCC TGGCCGGTAT CGCCACGGCG
GCCACAGGCC TCGCCGTCTC CGGTATGGTG AGCCCGGCCT TTGCCGCCGC CGAAATGCCC
AAGCCCGACA ATGATGTCGA TATGGCAGAG GTGATGAAAC CCGGCCCGCT GCCGGACATG
GCACTCGGCA AGCCCGACGC GCCAGTCAAG ATCGTTGAAT ATTTCTCGAT GACTTGCCCG
CATTGCGCCC ATTTCCACGC CACGACCTTC GATACGATCA AGGAAAAATA CATCGATACC
GGCAAGGTCT ATTTCGTGTT CCGCGAGTTT CCTTTCGATC CCGCCGCCAC CGCCGCCTTC
ATGCTGGCGC GTTGTGCCCC GAAGGATCAA TATTATCCCT TCATCACCAT GTTCCTGAAG
CAGCAGCGCT CCTGGGCCGC GCCTGACAAC GGCGATGTGC GTGGTGCTAT GCTGCAAATG
TCGAAAATGG CCGGTTTCAC ACAGGAAAGC TTCCAGGCTT GCTTGACGAA CACCAAGCTT
GCCGGTGATG TAACCGCAAT GCGGGACCTT GGCGCCAAGC AATTCGGCGT CAACGCAACC
CCGACCTTCC TGATCAACGG CAAAAGCTAT TCTGGAGATA TGTCGGTTGA ATCCATGTCG
GCGCTCATCG ACAGTCTTCT CTGA
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| Protein sequence | MSNSELTLTK RHLLAGIATA ATGLAVSGMV SPAFAAAEMP KPDNDVDMAE VMKPGPLPDM
ALGKPDAPVK IVEYFSMTCP HCAHFHATTF DTIKEKYIDT GKVYFVFREF PFDPAATAAF
MLARCAPKDQ YYPFITMFLK QQRSWAAPDN GDVRGAMLQM SKMAGFTQES FQACLTNTKL
AGDVTAMRDL GAKQFGVNAT PTFLINGKSY SGDMSVESMS ALIDSLL
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