| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1063 |
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| Symbol | |
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| ID | 7387146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 897414 |
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| End bp | 898286 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650554 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002548762 |
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| Protein GI | 222147805 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.21744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTT ACGATCTGCT GATCGCGCCA TTTGCCGATT ACGGCTTCAT GCGCCGGGCG
CTGGTCGCCT CCCTCTGCCT CGGTCTCGGC TCCGGCCCGA TCGGCGTGTT TCTGATGCTG
CGGCGCATGA GCCTGGTTGG TGATGCCATG AGCCATGCGG TGCTGCCCGG AGCTGCGATC
GGCTACCTGA TCGCCGGGTC CCTGTCGCTA ACCGCCATGG GACTGGGCGG GCTGGTGGCC
GGTCTCTCCG TGGCGCTACT ATCAGGCTTT GTCACCCGAT CGACCGTGTT GCAGGAGGAT
GCCAGCTTTG CCAGTTTTTA CCTGACATCC CTGGCACTGG GCGTGCTGAT CGTGTCGCTG
CGCGGTTCCA ACATCGATCT TTTGCATGTG CTGTTCGGGA CGATCCTGGC CATCGACAAT
GATGCGCTGG TGCAGATCGG CGCCATTGCC TCTTTCTCCC TACTGGCACT GGCCGTCATC
TACCGGCCAC TGGTGACCGA GTGCCTCGAC CCCGGCTTCC TGCGGGCCGT CGGCGGTCGT
GGACCGGTCT ATCATTTCCT GTTCCTGTTT CTCGTCGTGC TCAATCTGGT CGCCAGTTTC
CAGGCGCTCG GCACGTTGAT GGCCGTAGGA TTGATGATGC TTCCTGCCGC CATTGCCCAG
CTCTGGTGCC GCAGCCTGCC CGGCATGATG GTGGTGGCAG CGGCAAGCGG CATCGTCGCC
AGCTATCTCG GCCTGATTGC CTCCTACCAT CTGGAACTGG CCTCCGGGCC GACGATCATC
CTGGTCGCGG CGCTGTTTTA CGGCCTGTCC ATTCTGTTTG CGCCCTCCGG TGTGTTCCGG
CGGTTTCTTC CAAGTTCCCA TCTGAAAGCC TGA
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| Protein sequence | MTAYDLLIAP FADYGFMRRA LVASLCLGLG SGPIGVFLML RRMSLVGDAM SHAVLPGAAI
GYLIAGSLSL TAMGLGGLVA GLSVALLSGF VTRSTVLQED ASFASFYLTS LALGVLIVSL
RGSNIDLLHV LFGTILAIDN DALVQIGAIA SFSLLALAVI YRPLVTECLD PGFLRAVGGR
GPVYHFLFLF LVVLNLVASF QALGTLMAVG LMMLPAAIAQ LWCRSLPGMM VVAAASGIVA
SYLGLIASYH LELASGPTII LVAALFYGLS ILFAPSGVFR RFLPSSHLKA
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