| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1027 |
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| Symbol | |
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| ID | 7387117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 870437 |
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| End bp | 871486 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650525 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548733 |
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| Protein GI | 222147776 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.504748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGGA CTATTTTCAA GCAGGGGCTG ATCGCGGGCG GACTGGTCGC GGCGGGGATG
GCGCGCAGGT TCGGTGCGTG GAAGGATGCG CGCGGACTCG GCGCGATCTT CACCCTGCAT
CAGGTGCGCC CATATCTTCC TCTGAGACCC GACCCCAACC GGCATCTGGA AATCACCCCC
AAATTCCTGG ATACTGCCCT TCGCGCCCTG TGGCGGGAAA ATTACGAATT CATCCGCCTG
GAAGATGTGC CCGCACGGCT TGCCACAGGG CCAGGTCAAA GGCCGTTTGC GGCCTTTACT
CTTGATGATG CCTATTACAG CAGCCGTGAC TTCGCCCTGC CGATCTTCGA GCGGTTCGAT
GCGCCCTTCA CGGTTTTTGT CTGCCAGGGC CTCAGCGAGC GCAGCCATGG CCTCTGGTGG
GAAACCCTTG CTGCCCTGAC CCGCAAGGCT GAGCAGCTGA AATGGGACTT CGACGGCAGG
AGGCGCATCC TGTCCACCGA CACGCCATTG CGCAAAGCCG CCGCGTTCCG GCAGATCGCC
AGCCAGATTA CGGCGATGAA CGAGGCAGAC ATGATCGGCA GGCTAAACGG GATGGCGGCA
GAGGTCGGCA TAGACAGCCG CGACATCGTT GCCAAAGCCA TCCTGCCCTC GGAGGCGCTG
GCCGATTTTG CCGCCCATCC GCTGGTCAGC CTGGGCGCTC ATACGGTCAG CCATCGAGGC
TTAACCGGGC TTGATGATGA AACGGTGCAG CAGGAGTTGA AACTCTGCGC CGATTATCTC
GAAACCCTGA CCGGAACGCG ACCGGTCAGT TTCGCCTATC CCTATGGCGA TGGCCGTAGC
GTCAATCAGC GTACCATCGA TTTGGTGCGC GAGGCCGGTT TCCGTCTGGC AGTCACCACC
CAGCCCGCGA CACTGTTTGC AAAGGACGGA CAGCGCTTGC ACGCCCTGCC GCGCATTTCA
CTCAATGGTC ATTTCCAGAC GCCAGCCACG GTCCGGACGC TGGCATCGGG CATTCCCTTT
CGCCTGATGT CACGCAAACC GGCTGCGTGA
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| Protein sequence | MDGTIFKQGL IAGGLVAAGM ARRFGAWKDA RGLGAIFTLH QVRPYLPLRP DPNRHLEITP
KFLDTALRAL WRENYEFIRL EDVPARLATG PGQRPFAAFT LDDAYYSSRD FALPIFERFD
APFTVFVCQG LSERSHGLWW ETLAALTRKA EQLKWDFDGR RRILSTDTPL RKAAAFRQIA
SQITAMNEAD MIGRLNGMAA EVGIDSRDIV AKAILPSEAL ADFAAHPLVS LGAHTVSHRG
LTGLDDETVQ QELKLCADYL ETLTGTRPVS FAYPYGDGRS VNQRTIDLVR EAGFRLAVTT
QPATLFAKDG QRLHALPRIS LNGHFQTPAT VRTLASGIPF RLMSRKPAA
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