Gene Avi_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1014 
SymbolribA 
ID7387108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp859487 
End bp860587 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID643650516 
Product34-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II 
Protein accessionYP_002548724 
Protein GI222147767 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATG AGCAGACCCG TGTCGTTGAC GCTATCCGGG CTTTTGAAGC CGGTGAAATC 
GTTATCGTCA CCGATGACGA CGACCGCGAG AACGAAGGTG ACCTGATCGT TGCCGCCGTG 
CATTGCACGT CGGAGAAGAT GGCCTTCATC ATCCGCCATA CGTCAGGCAT CGTCTGCACC 
CCAATGCCGA AGGAGGAAGC CAAGCGGCTG AACCTGTCGG CCATGGTCGC CGAAAACGAC 
AGCGCCCATA CGACAGCCTT TACGGTCAGC GTCGATTTCA AGCATGGAAC CACGACCGGC 
ATATCCTCTG ATGACCGGAC GCTCACAGTT CGCAATCTCG CCAATCCCAA TGTCGGTCCC 
GCCGATTTCG TCCGCCCCGG CCATATTTTC CCGCTGGTGG CGCGCGAAGG TGGCGTGTTG 
ATGCGGTCAG GCCATACGGA AGCAGCCGTC GATCTCTGCC GGCTGGCCAA CCTGCCGCCG 
ATCGGCGTGA TCTCGGAAAT GGTCAATGAC GACGGCACGG TGATGCGCGG CCCGCAGGTC 
TCGGCCTTTG CCGAAAAGCA CAAGCTGAAA CAGATCTCGG TCGCCGACTT GATTGCCTAT 
CGCCAGCGCA AGGAAACCCT GATCCAGCTG ATGTCGACAT TCGAGATCCA GACGGCTTAT 
GGCCCGGCCA AGGCCCATGC CTATTCCCTA CCCTGGGATC CGATGCAGCA TCTGGCGGTG 
GTGTTCGGTG ACATCCGCGA CGGCGTCGAT ATTCCAGTGC GTCTGCATCT GGAAAATGTT 
GGTGCCGATG TGTTCGGCGG CGCCCGCCAG ATCGATAGCA TGCTGAAACG GATCGCAGAA 
AAAGGCCGCG GCATTATCGT TTATCTGCGC GAAGGCTCCG TCGGGGTTGG CGCCTCCACG 
ACGGCCAGGG GAGGCATGCA TGACCGCGAG GCCCATCAGG AAGCCCAGAC GCGCGAAAGC 
GAATGGCTGG AAATCGGCCT CGGCGCCCAG ATCCTGAAAG ATCTCGGCGT CACCTCGATC 
CGGCTGATGG CCTCGCGTGA ACGCCATTAC GTCGGCCTGG AGGGCTTTGG CATCAAGATT 
TCGGAAACCG AGATCGCCTG A
 
Protein sequence
MTYEQTRVVD AIRAFEAGEI VIVTDDDDRE NEGDLIVAAV HCTSEKMAFI IRHTSGIVCT 
PMPKEEAKRL NLSAMVAEND SAHTTAFTVS VDFKHGTTTG ISSDDRTLTV RNLANPNVGP 
ADFVRPGHIF PLVAREGGVL MRSGHTEAAV DLCRLANLPP IGVISEMVND DGTVMRGPQV 
SAFAEKHKLK QISVADLIAY RQRKETLIQL MSTFEIQTAY GPAKAHAYSL PWDPMQHLAV 
VFGDIRDGVD IPVRLHLENV GADVFGGARQ IDSMLKRIAE KGRGIIVYLR EGSVGVGAST 
TARGGMHDRE AHQEAQTRES EWLEIGLGAQ ILKDLGVTSI RLMASRERHY VGLEGFGIKI 
SETEIA