| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1009 |
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| Symbol | speB |
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| ID | 7387103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 855514 |
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| End bp | 856470 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650511 |
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| Product | agmatinase |
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| Protein accession | YP_002548719 |
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| Protein GI | 222147762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01229] arginase
[TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCTCAT CCTTTCATCA GCCTGTCGAT GCCGCTGAAG TGCCGCGTTT TGCCGGACAT
GCCACCTTCA TGCGTCTGCC TGCCGTGACC TCGGCGGAAG GGCTTGATAT TGCGCTGATC
GGCATTCCCT GGGATGGCGG CACCACCAAC CGGGCCGGTG CCCGCCATGG GCCGCGCGAG
GTCCGCAACC AGTCCAGCCT GATGCGCCGG GTGCATCATG TCTCAAAAAT CGAGCCGTTC
ATCCTTGCCA ATATTGCCGA TGTGGGGGAT GTGACCGTCA ACCCCATCGA CCTGATGCTG
GCGCTTCAAC AGATAGAAGA CGGCGTGGCG GCGGTGGTTG CAGCGGGAGC CCTGCCGCTC
TGCGCCGGGG GCGATCATTT GACGACACTG CCGGTGCTAC GGGCGGTGGC GAAATCTCAG
CCAGTCGGGC TCATTCATTT CGATGCCCAT TCCGATACCA ATGACAGCTA TTTCGGCGGC
CAGCGCTTTA CCCACGGCAC GCCCTTTCGC CGCGCCATTG AGGAGGGCCT GCTCGATCCG
AAACGCATGG TGCAGATCGG CATTCGCAGC TCCAATTACG AAGTCGATGA ACATCAATGG
GCCAAGGACC AGGGCATCCG CATTATTTAT ATGGAGGAAT TCGTCGCCCG CAGCGTGGCA
GACGTGATGG CGGAAGCCCG CGCCATTGCC GGTGATGGCC CGACCTATGT CAGCTTCGAT
ATCGACTGCA TCGACCCATC GATGGCGCCT GGAACCGGCA CACCGGAAAT CGGCGGCTTC
CTGACCCGCG AAGTGCAGGC CATGGTGCGG CTGCTGGAGG GCGTCAATAT TGTCGGTGCC
GATGTGGTGG AAGTCGCGCC ACCCTTCGAT GTCGGCGGTA TGACGGCGCT GGCCGGTGCT
ACCATGATGT TTGAACTGCT CTGCGTTATG GCGAAAGTGG TGGCGGATCG GCGTTGA
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| Protein sequence | MTSSFHQPVD AAEVPRFAGH ATFMRLPAVT SAEGLDIALI GIPWDGGTTN RAGARHGPRE
VRNQSSLMRR VHHVSKIEPF ILANIADVGD VTVNPIDLML ALQQIEDGVA AVVAAGALPL
CAGGDHLTTL PVLRAVAKSQ PVGLIHFDAH SDTNDSYFGG QRFTHGTPFR RAIEEGLLDP
KRMVQIGIRS SNYEVDEHQW AKDQGIRIIY MEEFVARSVA DVMAEARAIA GDGPTYVSFD
IDCIDPSMAP GTGTPEIGGF LTREVQAMVR LLEGVNIVGA DVVEVAPPFD VGGMTALAGA
TMMFELLCVM AKVVADRR
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