| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0999 |
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| Symbol | |
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| ID | 7387097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 851151 |
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| End bp | 852086 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650505 |
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| Product | deacetylase |
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| Protein accession | YP_002548713 |
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| Protein GI | 222147756 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC GGCTCTATGA GAACCCGATC TTTCTGGAAC ACAACACGCC AGAAGGCCAT
CCTGAACGGG CCGACCGGCT GCGCTCGCTG AATATCGCCC TGGAGCATCC GAATTTTTCC
GCCCTGGAGC GCCATCAGGC GCAGCAGGCC AATGAGGATG CTGTCATGCT GGCCCATCCG
GAAGAGCATT TCATCGCTGT CATGCGGCAG GTGCCGGAGG AGGACGACCG GATCAACCAG
CTGGAGGCCG ATACCTATGC CTCGCAGAAA AGCCTGCAAT GCGCCCTGAC CGCCATCGGT
GGGGCGATGG CCGCCGTGGA CGACGTGATG ACCGGTGCTG CCGACAATGT GTTCGTGGCG
GGCCGTCCGC CCGGCCATCA TGCGGAAAAA ACCAAGGCGA TGGGCTTTTG CCTGTTCAAT
ACCATCGCCA TCGCTGCCCG CCATGCCCAG CAGGTCTATG GCGTCGAGCG GGTCGCCATC
GTCGATTGGG ATGTGCATCA CGGCAACGGC ACCCAGGATA TTTTCTGGGA CGATCCATCC
GTGCTGTTCT GTTCCACCCA CCAGATGCCG CTTTATCCCT GGACCGGCAA GAAGGATGAG
GTCGGGCCGC ACAACACCAT CGTCAATGCG CCGCTGTCGG CCAATAGCGG CTCGGACCAT
TTCCGCGAGG CGTTCAAATC GCGGGTGCTG ACGGCGCTCA ATGATTTTTC CCCGGATCTC
ATCCTGATTT CCGCCGGGTT TGATGCCCAT CACCGCGACC CGCTGGCACA GATCAATCTG
GTCGGTGAGG ATTTTGACTG GGCAACCGGG CGGCTGATGG AAGTGGCCGA CCGCTTTGCC
AAAAACCGGG TCGTCAGCCT GCTGGAAGGC GGCTATGATC TGGAAGGTCT GGCCGAGTCG
GCTGGCATGC ATATTTCGAG ATTGATGAAG GGTTGA
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| Protein sequence | MTTRLYENPI FLEHNTPEGH PERADRLRSL NIALEHPNFS ALERHQAQQA NEDAVMLAHP
EEHFIAVMRQ VPEEDDRINQ LEADTYASQK SLQCALTAIG GAMAAVDDVM TGAADNVFVA
GRPPGHHAEK TKAMGFCLFN TIAIAARHAQ QVYGVERVAI VDWDVHHGNG TQDIFWDDPS
VLFCSTHQMP LYPWTGKKDE VGPHNTIVNA PLSANSGSDH FREAFKSRVL TALNDFSPDL
ILISAGFDAH HRDPLAQINL VGEDFDWATG RLMEVADRFA KNRVVSLLEG GYDLEGLAES
AGMHISRLMK G
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