| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0956 |
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| Symbol | glyS |
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| ID | 7387740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 802014 |
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| End bp | 804308 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650468 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_002548676 |
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| Protein GI | 222147719 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATC TTCTGCTTGA ACTTCGCTCC GAGGAAATCC CTGCCCGCAT GCAGCGCAAG
GCGGCGGGTG ATCTGAAAAA GCTGGTCACG GATGCACTTG TCGATGCGGG CCTGACCTAT
GAAGGTGCGC GGGAATATTG GACGCCGCGC CGGCTGGTGC TGGACATTCG CGGACTGACG
GCCCGGTCTG CCGATGTGAA GGAAGAAAAG AAGGGGCCGA GCGTGTCGGC GCCAGAAAAG
GCCATCGAGG GCTTTTTGCG CGGCGCGGGG CTCGCCTCCA TCGATCAGGC CGTGGTCAAG
ACCGATCCCA AGAAGGGCGA TTTCTACGTC GCGATGATCG ACAAGCCGGG CCGGTCAGCC
GAAGAGATCA TTACCGAGGC GATGCCGGGC ATTATCCGCA GTTTTCCGTG GCCGAAGTCC
ATGCGATCAG GTGCGGCGTC CATGCCAAAG GGTTCACGCT ATGGCGGCAT CGAAGGCAAG
GGGTCGGAAA GCCTGCGCTG GGTGCGGCCG CTGCAATCCA TTCTCTGCAC CTTCGGCTCC
GAGCACGACG AAGTGGCGAT CATTCCCTTC GACATCGACG GGATCACCGC CTCCAACATC
ACCTATGGCC ACCGTTTCCA CGCGCCGGAG GCCATCACCG TGCGGCGCTT CGACGATTAT
GTGTCGAGCC TGGAAAAGGC CAAGGTGATC CTTGATGCCG AGCGGCGCAA GGATATCATC
CTTCACGACG CTCGCGACGT GGCCTTTGCC AATGGGCTGG ACCTGGTGGA AGACGAGGGT
CTGCTGGAAG AAGTGTCCGG CCTGGTGGAA TATCCGCAGG TCCTGCTTGG CACGTTTGAG
GCCGATTATC TGTCGATCCC CTCGGAAATC ATCCGGCTGA CCATCAAGAC CAACCAGAAA
TGCTTCGTCA CCCGGCCAAT TGGCGAGAGT GAAAAGCTCT CCAACCATTT CATCCTGATC
TCTAACATCG CCGCCCATGA CGGCGGCGCG GAAATCATCC ACGGCAATGG CAAGGTGGTC
CGCGCCCGCC TGTCCGACGC CCTGCATTTC TGGAAGCGTG ACCAGGGCAA TCTGCCGGAT
CTGGAAACGC TTGAAGCAAG CGCTGCAAAA TTCGGCCTCG ACCTGAAAAA GCCGCTCGAC
CAGCGGATGG CCAAGCTGGA TGCGCTGAAC GTGACCTTCC ACGCCAAGCT GGGAAGCCAG
GGTGAGCGTG TGGCCCGCAT CCGCGATTTG GCTAAGGTTC TGGCTCCTGT CGTCGGAGCC
GATGAAGCTT TGGTGGACCG CGCCGTGGTG CTGGCCAAGG CCGATTTGCG CACCGAAGCC
GTCGGCGAAT TCCCCGAACT GCAAGGCCTG ATGGGCCGCA AATATGCGAC GCTTCAGGGC
GAGCACGAAA GCGTCGCCGC AGCCATCGAA GATCACTACA AGCCACAAGG CCCATCGGAT
CGCCTGCCGG AAGACAAGGT GGCGATAACC GTGGCGCTGG CCGACAAGCT GGATACGCTG
GTTTGGTTCT GGGCGATTAA TGAGAAGCCG ACAGGGTCGA AGGACCCGTT TGCGCTGCGG
CGGGCGGCGT TGGGCGATGT CCGTATTTTG CTTGAGAAGA ATATACGTCT GTCCTTGCTT
GATGTTTTTG CTCATTCGTT GCTAGGCCGT TCACTTACGA GCGAGGAGAT TGAGCGAATT
ATTGATGCCG CTATTTACGA AAGTGTTGCG GGTGGAGCGC CCAAAGACAG TACTTCTTCA
AAGTACTCGC AGGAGTTTGC GTCGGTATTC TTGGGCGGGT CTCTCCTCTC CTTCTTCCAC
GACCGTCTGA AAGTCTATCT GCGCGATCAA GGCGCCCGCC ATGACATTAT CGACGCCGTG
CTGACGCCTG AGGCCGACGA CCTGCTGATG GTCGCCCGCC GCGCCGAAGC ACTCACCGCC
TTCATCACCT CCGAAGACGG CAAGAACCTG TTGGCGGGCA CCAAGCGCGC TACGCAGCTG
CTGGCGGCGG AGGAAAAGAA GGGAACGGTG GTGGCCGATG GCGTGTCCGA GGCGCTGCTG
ACACTCGACG CCGAAAAGGC GCTTTACGCC GCCATCGTGC AAGCCACCCA ATCCGCAGCC
GAGGCCGTCG CAAAAGAGGA TTTCCGCTCC GCCATGCAGG CGCTTTCCAC CCTGCGCGCC
CCGGTCGATA CATTCTTCGA GGATGTGTTG GTCAATGACG AGGACGCCGC CATCCGCGCC
AATCGCCTGG CGCTGTTGAA GGCCATCCGC GAGGCAACCG GCACGGTGGC GGATTTCTCC
AAAATTGCCG GGTAA
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| Protein sequence | MPDLLLELRS EEIPARMQRK AAGDLKKLVT DALVDAGLTY EGAREYWTPR RLVLDIRGLT
ARSADVKEEK KGPSVSAPEK AIEGFLRGAG LASIDQAVVK TDPKKGDFYV AMIDKPGRSA
EEIITEAMPG IIRSFPWPKS MRSGAASMPK GSRYGGIEGK GSESLRWVRP LQSILCTFGS
EHDEVAIIPF DIDGITASNI TYGHRFHAPE AITVRRFDDY VSSLEKAKVI LDAERRKDII
LHDARDVAFA NGLDLVEDEG LLEEVSGLVE YPQVLLGTFE ADYLSIPSEI IRLTIKTNQK
CFVTRPIGES EKLSNHFILI SNIAAHDGGA EIIHGNGKVV RARLSDALHF WKRDQGNLPD
LETLEASAAK FGLDLKKPLD QRMAKLDALN VTFHAKLGSQ GERVARIRDL AKVLAPVVGA
DEALVDRAVV LAKADLRTEA VGEFPELQGL MGRKYATLQG EHESVAAAIE DHYKPQGPSD
RLPEDKVAIT VALADKLDTL VWFWAINEKP TGSKDPFALR RAALGDVRIL LEKNIRLSLL
DVFAHSLLGR SLTSEEIERI IDAAIYESVA GGAPKDSTSS KYSQEFASVF LGGSLLSFFH
DRLKVYLRDQ GARHDIIDAV LTPEADDLLM VARRAEALTA FITSEDGKNL LAGTKRATQL
LAAEEKKGTV VADGVSEALL TLDAEKALYA AIVQATQSAA EAVAKEDFRS AMQALSTLRA
PVDTFFEDVL VNDEDAAIRA NRLALLKAIR EATGTVADFS KIAG
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