Gene Avi_0911 details

Gene Information

• Locus tag: Avi_0911
• Symbol: codA
• ID: 7387711
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 770349
• End bp: 770798
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643650439
• Product: cytidine and deoxycytidylate deaminase
• Protein accession: YP_002548647
• Protein GI: 222147690
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.312122
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTGA CAATCCGTTT CATGGATGTT GCCCTGGAAG AAGCCCAGCT GGCTGGCGCG 
CGCGGCGAGG TGCCAATTGG TGCCGTGCTG GTCAAGAACG GGGTCATTCT GGCCCGGGCT 
GGCAATGAAA CCCGTGCCTT GCAGGACGTG ACAGCCCATG CGGAAATCCT GGCGATCCGC 
CGTGCCTGCG CCATTCTGGA GGATGAGCGG CTGGCTGGCG CCGATCTCTA TGTGACGCTG 
GAACCCTGTA CAATGTGCGC GGCGGCAATA TCCTTTGCCC GTATCCGCCG CCTTTATTAT 
GGCGCGCCCG ATGAAAAGGG CGGGGGTGTT GACCATGGTG CGCGTTTTTA CAGCCAGCCC 
ACCTGCCATC ATGCGCCGGA TGTCTATGCC GGGATCGGCG AGACTGAGGC TGCCGCTCTG 
CTAAAGGACT TTTTCACCGC CAAACGGTGA 

 

Protein sequence

MTLTIRFMDV ALEEAQLAGA RGEVPIGAVL VKNGVILARA GNETRALQDV TAHAEILAIR 
RACAILEDER LAGADLYVTL EPCTMCAAAI SFARIRRLYY GAPDEKGGGV DHGARFYSQP 
TCHHAPDVYA GIGETEAAAL LKDFFTAKR