Gene Avi_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0871 
Symbol 
ID7387685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp739966 
End bp740403 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID643650412 
ProductPhage terminase protein 
Protein accessionYP_002548621 
Protein GI222147664 
COG category[L] Replication, recombination and repair 
COG ID[COG3747] Phage terminase, small subunit 
TIGRFAM ID[TIGR01558] phage terminase, small subunit, putative, P27 family 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0530685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC GCGGACGAAA AGCAGATTTG CGGGTCATTG AGGGCGGCGG CATGGAGCAA 
GTCCCGGATG GTGTCCCGTC GCATATCCCG GACGAAATGC GATCCGAATG GTTGGCTGTC 
GCCAATGATT TGAAGCAGCG GCGCATGCTG ACAGAAGCGA TGTTTGGCAG CGTTGATGCT 
TATGTCATGG CCATGTTCAA CGTCCGCAAG GCGCAAGAGG CCATCGATAA GCATGGCCTG 
CTGATCGACA GCGGCAAGGG CATTCTCAAG CAAAACCCAG CGGTCAGCCT GCTGGGCAAA 
GCGCAATCGG CAATCCTTCG CCTGTCGGCA GAACTGGGCC TGACGCCCGC CTCACGCTCC 
CGCTCGAAAA TGAAGGGCGG CGACGACGAC GACGTTCCTG GACAAAAGGA CATGTTCGAT 
GACGTCATGG ATTTTTGA
 
Protein sequence
MSTRGRKADL RVIEGGGMEQ VPDGVPSHIP DEMRSEWLAV ANDLKQRRML TEAMFGSVDA 
YVMAMFNVRK AQEAIDKHGL LIDSGKGILK QNPAVSLLGK AQSAILRLSA ELGLTPASRS 
RSKMKGGDDD DVPGQKDMFD DVMDF