| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0835 |
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| Symbol | |
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| ID | 7386315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 716866 |
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| End bp | 717747 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650387 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548596 |
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| Protein GI | 222147639 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGG ATGACGTTCG CATTTTTCTG GCCATTGCCC GCACCGGACA AATTCTGGCC
GCCTCAAAAC GGTTGGGGCT GAACCACGCC ACGCTCTCAC GCCGTTTGAC GGCGCTGGAA
GATGCGCTGA AAACACGGCT GTTCATTCGC CGCACCAATG GCTGCGAACT GACCGCCGAG
GGCGAGGTGT TTTTGGCCTC TGCCGAGCGG ATGGAAACCG AAATGCTGGA AGCCCAAGCC
CGCCTTGGAC GCACCGATGC CAAGGTGGCA GGCACGGTGC GGATTGGTGC GCCGGATGGG
TTTGGAGTGT TCTTTCTGGC CTCCCGGCTT GGCGGATTGA TCGAGCGACA CCCGGAACTG
AAAATCCAGC TGGTGCCGGT GCCACGCTCG TTTTCGCTGT CGCAACGCGA GGCCGATATT
GCCGTAACGT TGGAGCGGCC CGATCAGGGG CGCCTCGTCT CGGCGCATCT GACCGATTAC
AGCTTGGCGC TTTATGCCTC CCGCCAGTAT ATTGAGCGCC ACGGGTTGCC GGAGACCGTG
GAAGCCCTCA AGGATCATCA CCGCATTGGC TATGTGGAAG ACCTGATCTT CACGCCATCG
CTGAATTTTA CCGGCGAAAT CATGCGCAAC TGGAACGCCA GCTTTGAGAT TTCCTCCGCC
ATTGGCCAGA CGGAAGCGGT GCTGGCAGGC GCTGGGATTG GTATTTTGCA CAGCTACATC
GCGCGACAGC ACCGTGACCT AGTCCGCATT CTGCCCGACA TCACCTTGCA CCGTGCCTAT
TGGACCACCT ATCATGAGAG CCTGCGCGAT CTGGCCCGCA TTCGCACCGT GGTGGATTAC
TTACGCGAGC GGGTCGATCA GGATCGCGGT ATCTTTTTAT AA
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| Protein sequence | MNWDDVRIFL AIARTGQILA ASKRLGLNHA TLSRRLTALE DALKTRLFIR RTNGCELTAE
GEVFLASAER METEMLEAQA RLGRTDAKVA GTVRIGAPDG FGVFFLASRL GGLIERHPEL
KIQLVPVPRS FSLSQREADI AVTLERPDQG RLVSAHLTDY SLALYASRQY IERHGLPETV
EALKDHHRIG YVEDLIFTPS LNFTGEIMRN WNASFEISSA IGQTEAVLAG AGIGILHSYI
ARQHRDLVRI LPDITLHRAY WTTYHESLRD LARIRTVVDY LRERVDQDRG IFL
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