| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0823 |
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| Symbol | potB |
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| ID | 7386306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 704528 |
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| End bp | 705388 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650377 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002548587 |
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| Protein GI | 222147630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGTCG TCCTCCCCTA CCTCTGGCTG GGTTTGTTTT TCCTGGCGCC GTTCTTCATC
ATCGTGAAGA TCGCGCTATC GGATACGGCC ATCGCCATGC CGCCCTATAC ACCGGTCTTC
CAGGGCTTTT CGCAATTGGG CGATTTCCTG TCACAGCTGG ATTTCGAGAA TTTCCAGATC
CTCGGTGAAG ATCCGCTCTA TATCGAATCC TATCTGTCGT CGCTGAGGAT CGCGGCGATC
TCCACCCTGC TGCTGCTGTT GATCGGCTAC CCGATGGCGC TGGCCATGGC ACGCGCCAAG
CCGGAACTGC GCCCAACCCT TGTGATGATG GTGATCCTGC CGTTCTGGAC CTCCTTCCTG
ATCCGCGTCT ATGCCTGGAT CGGCATCCTG AAGCCGGAAG GGCTTTTGAC GCTGCTGCTG
CAAAGCCTGC ATATCTACGG TCCCGACCAG CAGGTGCATA TTTACCAGAC CGACATCGCC
GTCTTTATCG GCATCGTCTA TTCCTACCTG CCCTTCATGG TCCTGCCGCT CTATTCGGCT
CTGGAGAAGA TGGATGGCAG CCTGCTGGAA GCGGCAAGCG ATCTCGGTTG CCCGCCGATC
ACGGCCTTCT GGCGGATTAC CTTTCCGCTG TCCCTGCCGG GGGTGATTGC CGGGTCAATG
ATCTGCTTCA TTCCGATCAC AGGGGAATTC GTCATTCCCG ACCTGCTGGG CGGTGCCGAC
ACGTTGATGA TCGGCAAGAC CATGTGGACG GAGTTTTTCG GCAATCGAGA CTGGCCAGTG
GCCTCCGCCG TCGCCATCGT GCTGCTGCTT CTGCTTGTGG TGCCGATCAT GATTTTCCAG
AACCAGCAAA GCAAAGTGTG A
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| Protein sequence | MIVVLPYLWL GLFFLAPFFI IVKIALSDTA IAMPPYTPVF QGFSQLGDFL SQLDFENFQI
LGEDPLYIES YLSSLRIAAI STLLLLLIGY PMALAMARAK PELRPTLVMM VILPFWTSFL
IRVYAWIGIL KPEGLLTLLL QSLHIYGPDQ QVHIYQTDIA VFIGIVYSYL PFMVLPLYSA
LEKMDGSLLE AASDLGCPPI TAFWRITFPL SLPGVIAGSM ICFIPITGEF VIPDLLGGAD
TLMIGKTMWT EFFGNRDWPV ASAVAIVLLL LLVVPIMIFQ NQQSKV
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