| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0712 |
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| Symbol | |
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| ID | 7388737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 613398 |
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| End bp | 614051 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643650300 |
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| Product | cell surface polysaccharide export ABC-2 transporter ATP-binding protein |
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| Protein accession | YP_002548510 |
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| Protein GI | 222147553 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.517356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCACCC TTGAGAACGT AACGAAATAT TACAAGACAG CGGCGCATCG CCGGTTTATC
TTGCGCAATC AGAGCATGCA GTTTGTTGCC GGGCGGTCCT ATGGACTGCT TGGGGTGAAT
GGCGCCGGGA AGTCGACAAC CATGCGGCTG ATCTCGGGCG CAGAACTGCC CAACAAGGGG
CGTATTCACC GACAGGTACG GGTTTCCTGG CCGCTCGGCT TTGCCAATGG CCTGAACCAC
ATGTTGAGCG GAAAGGAAAA TCTGAAATTC GTCGCCAGGG CCTATGGCGA GGATTTTCAC
CGGGTGCTGC GCTTTGTTGC CGAATTTGCC GAAATTGGCA GCTATCTGAA TGAACCGTTG
CGCACCTATT CGTCCGGGAT GATGGCACGC TTTGCATTCG GCCTTTCCAT GGCCATCGAG
TTCGATTGTT ATCTCGTCGA CGAAATCACC GCTGTCGGTG ACTCGAATTT TCAGCGACGC
TGCCGGGAAG CCTTCAGGGC AAGACGTACA AAATCCGATG TCATCATGAT TTCTCACGAC
ATGGACACGA TTAAAGATTA TTGCGATGTC GCTCTTGTTT TAATTGACGG TCATATGGTG
CAATTCGATA GTGTCGAAGA GGGTATCGCC ACATACATGA GACTGAATCG CTAG
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| Protein sequence | MITLENVTKY YKTAAHRRFI LRNQSMQFVA GRSYGLLGVN GAGKSTTMRL ISGAELPNKG
RIHRQVRVSW PLGFANGLNH MLSGKENLKF VARAYGEDFH RVLRFVAEFA EIGSYLNEPL
RTYSSGMMAR FAFGLSMAIE FDCYLVDEIT AVGDSNFQRR CREAFRARRT KSDVIMISHD
MDTIKDYCDV ALVLIDGHMV QFDSVEEGIA TYMRLNR
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