Gene Avi_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0596 
Symbol 
ID7388987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp509280 
End bp509831 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content52% 
IMG OID643650215 
Producthypothetical protein 
Protein accessionYP_002548427 
Protein GI222147470 
COG category[S] Function unknown 
COG ID[COG3477] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGAAA ACAAGGTCAA TCGACAGGTT ATTGTCTGGA CCACCCTTGT CGGTGGTTTC 
ATCAGTTCAC TGGTCAAATG GGGATCTGAG GTCAATATGC CGCCGCGCGT GCCGGGCGAA
GTGTCACCTC CGGGGGCTCA TATCGATGCA TGGCTTGGAG GATTTGGCTT CAATTCGCAT
TCGCTCGATT ACATCTATCA GGGCGTCACC GTGCCTGGAG CTGTCACGCT GTATCACTGG
CTGTTCAGTT TCGCCTTTGC CCTGGTCTAT GTCTTTGCTT CCGCCTATTG GCCGAAGATC
AGGCTCTGGT ACGGCGCTTT TTATGGATTG ATCATCACCG TGGTGATGCA TGGATTTCTT
ATCCCGTTGC TCGGCTTTCG AAATCCGGTT TATGCCAATG GCGCCACAGG ATGGCTGTGG
AACCTCAACG CCTTTGAGCT TTGGAGCGAG ATCCTCGGCC ATATCTATTG GTCGGTCTCG
ATTGAAATTT GCATGATTGC GGTTCTTGCC TATTTCGCCA GGCCTATTCA GGGCGATTGG
GTCAAGGCTT AA
 
Protein sequence
MLENKVNRQV IVWTTLVGGF ISSLVKWGSE VNMPPRVPGE VSPPGAHIDA WLGGFGFNSH 
SLDYIYQGVT VPGAVTLYHW LFSFAFALVY VFASAYWPKI RLWYGAFYGL IITVVMHGFL
IPLLGFRNPV YANGATGWLW NLNAFELWSE ILGHIYWSVS IEICMIAVLA YFARPIQGDW
VKA