| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0484 |
|---|
| Symbol | |
|---|
| ID | 7388484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 409694 |
|---|
| End bp | 410245 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643650129 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548343 |
|---|
| Protein GI | 222147386 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5352] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.451556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGA CGGACGAGCG AGTTGAAAGA CTCACGAAAT TATGGGCCGA AGGCCTGAGC
GCAAGTCAGA TTGCGACGCA GCTTGGCGGC GTCAGCCGGA ATGCCGTGAT TGGCAAGGTG
CATCGGTTGT GCCTTCCCGG ACGCGCCAAG GCAGGCGGTC CCGCCGCGAC ACCAGCGCGC
ACACCCAAGC GGCCAGCGCC GTCCACGCCT CGTGCACCGA GTTTTGCCGC ACGCACGCCT
TCAAGCGCGC CGCGTCCTGC CGCGCGCACT GCTGCGGCGA CCGCGCTGAA CGAAGATCTC
GACATGGATG TCACCGAGAA CATGGCTGCT TTGCCGGTTC TCAACACCAC CATTCTGCCA
GCCTCGCGCC GTCTGTCGCT GACGGACCTG ACCGAGCGGA CCTGCAAATG GCCGGTTGGC
GACCCGATGA CCGACGAGTT TCACTTCTGT GGCTGCGACA GCCAGGACAA TTCTCCCTAT
TGCAAATATC ACGCGAAGCT CGCCTACCAG CCGGTAAACG AGCGGCGCCG GGCTGCTGCG
AACGCGCGCT GA
|
|---|
| Protein sequence | MNWTDERVER LTKLWAEGLS ASQIATQLGG VSRNAVIGKV HRLCLPGRAK AGGPAATPAR
TPKRPAPSTP RAPSFAARTP SSAPRPAART AAATALNEDL DMDVTENMAA LPVLNTTILP
ASRRLSLTDL TERTCKWPVG DPMTDEFHFC GCDSQDNSPY CKYHAKLAYQ PVNERRRAAA
NAR
|
|---|
| |