| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0359 |
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| Symbol | ugpC |
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| ID | 7387804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 307451 |
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| End bp | 308557 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650030 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sn-Glycerol-3-phosphate) |
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| Protein accession | YP_002548245 |
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| Protein GI | 222147288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCCA TCGATATCAA TCAGGTCTCG AAAATCTATG ACGGCGGTGT GCGTGCGGTC
AACAGCGTGG ACATCCAGAT CAACGACGGC GAATTCATCG TGCTGGTCGG CCCCTCCGGC
TGTGGCAAAT CGACATTGCT GCGCATGGTG GCCGGGTTGG AAAGCATATC CGAGGGCGTG
GTGCGCATTG GTGATCGGGT GGTCAACACG GTTGAACCGG CGGACCGCGA CATCGCCATG
GTTTTCCAGA ATTACGCGCT CTACCCGCAT ATGACGGTGC GGCAGAACCT GGCCTATGGC
CTGAAAAACC GCAAAACCCC TAAGGACGAG ATTGACGCAC GCGTGGCCGA GGCCGCCCGG
ATGCTGGAAC TGCAACCCTA TCTGGACCGC AAGCCCAAGG CACTGTCCGG TGGCCAGCGC
CAGCGCGTTG CCATGGGCCG TGCCATCGTG CGCAAGCCGG CCGTTTTCCT GTTTGACGAG
CCGCTGTCCA ATCTCGATGC CAAGCTGCGC GTCTCCATGC GCGTCGAGAT CCGCAAGCTG
CAACGCCGGC TTGGTACGAC ATCGATCTAT GTCACGCACG ACCAGCTGGA AGCGATGACG
CTGGCCGACC GGCTGGTGGT GCTGAACGGT GGCCGGATCG AGCAGATCGG TACGCCGCTT
GAAGTCTATC ACGCGCCTGC CTCGACCTTC GTTGCCAGCT TCATCGGCTC CCCGGCCATG
AACCTTGTCA CCGGCCGCCT GGATGGCAAT CGTCTGTCGC TTTGGCCGGT CAGCTTCACC
TTCGAGGGCG AGACCGATTA TCGCGGCGAA GTCACGATCG GCCTTCGGGC GGAGGATCTG
ACGGTTGCAG CCCCTGGTCA GCCCTATGTG CCATTCCGTG TCGATTATGT GGAAGAATTG
GGTGCTGTCC GCCTCGTACA TGGGTTTGTC GGCGATCAGG CTCTTTGCGC CTCGCTGCCG
GTTTCGACGG TGCTGTCAAA CGAGATGCGG CTGGGGGTCG ATCCACAGAA ATTCCACTTC
TTCGACCGGG AAGGCCGCCG CCTTGCTCTG CCCTTTGCCA CCGCACAGAT GACCTTCGGG
GCTCAGGCTG AGACGGTAGA GGCCTGA
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| Protein sequence | MASIDINQVS KIYDGGVRAV NSVDIQINDG EFIVLVGPSG CGKSTLLRMV AGLESISEGV
VRIGDRVVNT VEPADRDIAM VFQNYALYPH MTVRQNLAYG LKNRKTPKDE IDARVAEAAR
MLELQPYLDR KPKALSGGQR QRVAMGRAIV RKPAVFLFDE PLSNLDAKLR VSMRVEIRKL
QRRLGTTSIY VTHDQLEAMT LADRLVVLNG GRIEQIGTPL EVYHAPASTF VASFIGSPAM
NLVTGRLDGN RLSLWPVSFT FEGETDYRGE VTIGLRAEDL TVAAPGQPYV PFRVDYVEEL
GAVRLVHGFV GDQALCASLP VSTVLSNEMR LGVDPQKFHF FDREGRRLAL PFATAQMTFG
AQAETVEA
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