Gene Avi_0326 details

Gene Information

• Locus tag: Avi_0326
• ID: 7387777
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 280369
• End bp: 281022
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643650003
• Product: Transcriptional regulator protein
• Protein accession: YP_002548218
• Protein GI: 222147261

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATTG TGTTGAACTC TGACGATTCA AATTCACCGC AGCAGGGCCG GCCGCGCGAT 
AAGAACCTTG ATGATGCGCT TATTCGCGTC ACGCTTGAGC TTCTCAGCCA GACGGGTCTT 
GAGGGTGTGA CCATGGCCAA GGTCGGACGG CTGTCCGGTA TTCCCGCGAC CAGCATTTAC 
AGACGCTATC CAGATGCAAA GAGCCTGATC GTTGCGGCGA TTGAGGATGA TCTCGCAAAG 
CTGCAATTGC ACTTGGAAGA CCATGGTTCT CTGCGTGCCG ACCTGCTCGC GTTTTTGAAA 
ACGCTTGCCG AAGCGCTTAA TCCAGAGCGG GCGCGTATGC TCGCCGGCCT GCTATTGCCC 
ATGCACCATG ATCCGGAATT AGCAGCTCTG CTTTCCAGGA AACTCGAAGC AATCCGCAAC 
GAAGGATGGC GTGGTGTCAT TGATCGGGCT GTGCAAAGGG GAGCATTGCG GGCGCAGGCC 
CTGGATGCGG TGCCGCTCGA CGATGTGGCG CAAACGATGA TTTTCTATCA AGCGGTGGTG 
AAGCGCATGC CGGCTGACGA AGCTTTCCTC AACCGACTGC TGGATACGGT TTTGATGCCT 
GCGCTACAGC GCCTGGGGAG TGGCGAGCCA GAAGCAAACG TCGACGATGC TTGA 

 

Protein sequence

MSIVLNSDDS NSPQQGRPRD KNLDDALIRV TLELLSQTGL EGVTMAKVGR LSGIPATSIY 
RRYPDAKSLI VAAIEDDLAK LQLHLEDHGS LRADLLAFLK TLAEALNPER ARMLAGLLLP 
MHHDPELAAL LSRKLEAIRN EGWRGVIDRA VQRGALRAQA LDAVPLDDVA QTMIFYQAVV 
KRMPADEAFL NRLLDTVLMP ALQRLGSGEP EANVDDA