| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0280 |
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| Symbol | phnD |
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| ID | 7387579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 239008 |
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| End bp | 239916 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649969 |
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| Product | ABC transporter substrate binding protein (phosphonate) |
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| Protein accession | YP_002548184 |
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| Protein GI | 222147227 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAAGA AAATTCTGCT TGCCTCCGTG ACGCTTCTGT CGCTGGCCGG CGTGGCTGCT
GCCGAAGACC TGAAGGAATT CCGCATCGGT ATTCTTGGCG GCGAGAACGA AGCCGACCGG
TTGCGCAATT ACAACTGCCT GTCCGATCAC CTGAAGAAGG AATTCGGCTT CACCAAGGTT
TCGCTGTTCC CGGCCTCGGA CTATGACGGC GTTATCCAGG GTCTTCTGGG TGGCACGCTT
GATTATGCCG AGCTTGGCGC TTCCGGCTAT GCCAAGGCCT ATCTGGCTAA CCCGAAGGCA
GTCGAGCCGA TCCTGACCAC GGTGCAGACC GATGGCTCGA TGGGCTATTA CTCGATCATG
GTGGCCCGCA AGGACAGCGG CATGACCAAA GTCACCGACA TCAAGGGCAA GAAGCTCGGT
TTTGCCGATC CTGACAGCAC ATCCGGCTAC CTGATCCCGA CCGTCACCCT GCCCGACGCG
CTCGGCGGCA AGCCGGTCAA GGAATATGTC GGTTCCACTG GTTTTGGCGG CGGCCATGAA
AACCTGGTTC TCGAAGTGCT GAAGGGCACG TTCGATGCTG GCACCACCTT CGGCTCCGGC
GTTGGCAATT TCAAGGACGG CTACACGTCC GGCAACCTGC GCAAGATGGT CGATAAGGGC
GTCCTCAACA TGGACGACCT GGTGGAATTG TGGAAGTCGC CGCTGATCCC GAACGGCCCG
ATCGTCATCC GCTCCTCGAT GAACGAGGAC ATGAAGACCA AGGTCAAGGC CTTCATGATG
GATCTGCCGA AGACCGACGC CGCCTGCTTC TCCGCCATCG AAGGCGGCGA TTTCAAGGGC
TTTGCGGCTG TGAATGTCGA TTTCTACAAG CCGGTCATCG ACGCCCGCAA GGCAACCATC
GGCGGCTGA
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| Protein sequence | MLKKILLASV TLLSLAGVAA AEDLKEFRIG ILGGENEADR LRNYNCLSDH LKKEFGFTKV
SLFPASDYDG VIQGLLGGTL DYAELGASGY AKAYLANPKA VEPILTTVQT DGSMGYYSIM
VARKDSGMTK VTDIKGKKLG FADPDSTSGY LIPTVTLPDA LGGKPVKEYV GSTGFGGGHE
NLVLEVLKGT FDAGTTFGSG VGNFKDGYTS GNLRKMVDKG VLNMDDLVEL WKSPLIPNGP
IVIRSSMNED MKTKVKAFMM DLPKTDAACF SAIEGGDFKG FAAVNVDFYK PVIDARKATI
GG
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