| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0158 |
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| Symbol | |
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| ID | 7388324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 140493 |
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| End bp | 143930 |
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| Gene Length | 3438 bp |
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| Protein Length | 1145 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649880 |
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| Product | Hemolysin-type calcium-binding protein |
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| Protein accession | YP_002548098 |
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| Protein GI | 222147141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACTT TAACGGGCGA TTCTGGAAAT AATACTTTAA ACGGAACAAC AGCGGCAGAT
ACAATTTCGG GCCTAGCTGG CGACGACATA TTAAACGGTA GCGATGGTAA CGATACGCTA
GATGGTGGCG AGGGAGCCGA TACACTGAAC GGCGGCGCTG GTACTGATAC GGCAAGCTAC
GCCAGTTCGT CAGCCGCTAT CAAAATCAAT CTCGTCACCG GCACGAATAC GGGCGGTGAT
GCCGCAGGTG ATACGCTGAC CGGCATCGAC AAGATTATCG GCTCTGACTT CAACGACACA
TTCACCTCGA ATTCCGAGAT TACCTTGGCA GGCGGCAAAG GGGACGATAC CTATGTCGTG
GGCAACAGCA ACGTCTCCGT CTCCGAAAGC ACTGGTGCGG GCAGTGACAC GGTCCGGGCC
TCGGTGAACT ACACGCTGTC GAACTATGTC GAAACGCTGG AATACATAGG AGTTGGCGAC
TTTACCGGTA CCGGCAGCGC GCAGGATAAC ACGATCATCG GTGGTGCTGG CAACGATACG
CTAATCGGCA AGGCTGGTGC CGACATCCTG AACGGCGGCG ACGGTTCCGA CACGGCAAGC
TATGAGGGAA GTGCAGCGGT CAATGTCAAT CTCAAAACCG GGGTAACATT CGGTGGAGAC
GCCGCTGGCG ATACATTCAC CAGCATCGAA AACCTCACAG GCACCAGCAG TGCCGACACG
CTGACGGGGG ATGACAACAA CAACGTTCTC AACGGTGGCG ATGGCAATGA TACGCTGGCA
GGCGGCAATG GAGCAGACAC GCTGAACGGT GGGAATGGTG CTGACACCTT GGAAGGTGGC
GAGGGTGCCG ATACGCTGAG CGGTGGTATT GGTACTGACA CCTTGGTCGG TGGCGAAGGT
GCCGACACGC TGACCGGCAG TGATGGCGAT GACACCTTGA TAGGTGGCGA GGGAGCAGAC
ACGCTGAGCG GTGGCGCTGG AACTAACACG GCAAGCTACG CCAGTTCGTT AGCCGCTATC
CAAATCAATC TCGTCACCGG CACGAATACG GGCGGTGAGG CAGCAGGTGA TACGCTGAGC
AGTATCGACA AGATTATCGG CTCAGACTTC AACGACACAT TCACCTCGAA TTCCGAGATT
ACCTTGGCAG GCGGCAAAGG GGACGATACC TATGTCGTGG GCAACAGCAA CGTCTCCGTC
TCCGAAAGCA CTGGTGCGGG CAGTGACACG GTCCGGGCCT CGGTGAACTA CACGCTGTCG
AACTATGTCG AAACGCTGGA ATACATAGGA GTTGGCGACT TTACCGGTAC CGGCAGCGCG
CAGGATAACA CGATCATCGG TGGTGCTGGC AACGATACGC TAATCGGCAA GGCTGGTGCC
GACATCCTGA ACGGCGGCGA CGGTTCCGAC ACGGCGAGTT ATGAAGGAAG TGCAGCAGTC
AATGTCAATC TCAAAACCGG TGTAACATCC GGTGGAGACG CCGCTGGCGA TACATTCACC
AGCATCGAAA ATCTCACAGG CACCAACAAT GCCGACACGA TGACGGGGGA TGACAACAAC
AACGTTCTCA ACGGTGGTGG CGGCAATGAC ACGCTGGCAG GCGGCAACGG AGCAGACACG
CTGAACGGCG GTGATGGCGA TGACAGCTTG GTAGGCGGCG AGGGAGCCGA TACATTGAAC
GGTGGTATTG GTACTGACAC GGCAAGCTAC GCCAGTTCGT TAGCCGCTAT CAAAATCAAT
CTCGTCACCG GCACGAATAC GGGCGGTGAT GCCGCAGATG ATACGCTGAG CGGCATCGAC
AAGATTATCG GCTCTGACTT CAACGACACA TTTACTGCAA ACTCAACAAT AACCTTTGCA
GGCGGCAAAG GAGATGACAC CTATGTCGTG GGCAACAGCA ACGTCTCCGT CTCCGAAAGC
ACAGGTGCGG GCAGTGACAC GGTCCGGGCC TCGGTGAACT ACACGCTGTC AGACTATGTC
GAAACGCTGG AATACATAGG AGCTGGCTAC TTTACCGGCA CCGGCAACAC ACAGGATAAC
ACGATCATCG GTGGTGCTGG CAACGATACG CTGATCGGCA AGGCGGGTGC CGACATCCTG
AACGGCGGCG ACGGCTCCGA CACGGCGAGC TATGAGGGAA GTTCGGCGGT TAATATCAAC
CTCAAGAGCA ATGTAGCGAC CGGCGGCGAA GCGGCTGGCG ATACATTCAC CAGCATCGAA
AACCTCACGG GCACCAGCAA TGCCGACACG CTGACGGGTA ATGACAACAA CAACGTTCTC
AAAGGTGGCG ATGGCAATGA TACGCTGGCA GGTGGTAAAG GAGCCGATAC GCTGACCGGT
GGGAATGGCG ATGACACCTT GGAAGGTGGC GAGGGTGCCG ATAAACTGGA CGGTGGTATT
GGTAATGACA CCTTGGTAGG TGGCGAAGGT GCCGACACGC TGACCGGCAG TGATGGCGAT
GACACCTTCG TAGGTGGCGA GGGTGCCGAC ACGCTGAGCG GTGGCGCTGG TACTGACACG
GCAAGCTACG CCAGTTCGTT AGCCGCCATC AAAATCAATC TCGTCACCGG CACGAATACG
GGCGGTGAGG CAGCAGATGA TACGCTGACC GGCATCGACA AGATCATCGG CTCTGACTTC
AACGACACAT TCACCGCATC GAGCTCCATC ACCCTGGCGG GCGGCAAAGG AGATGATACC
TATGTCGTCA GCCAGATTGC CACCACGACG GTTTTGGTCG AAGAGGCCAG CGCTGGCACG
GATACGGTTG AAACAACCTT GACCAGCTAC ACGCTGAAAA CCAATTTCGA AAACCTCACC
CACACTGACT CGACCAATTT TCTCGGTTAC GGCAATAGTG CCGACAATGT CATCGTCAGT
CAGGGTGGCG TCGATAAGCT CTATGGCTAT GCCGGCAACG ATACGATCCG TGGCGGCAGC
GGTGGTGATA CCATTGATGG TGGCGACGGA AGCGACACGG CAAGCTACAG CGATTCCACC
GCAGCGGTGA CCATTAATCT CCTCACGAAA ACGATCTCCG GCGGTTACGC AACAGGCGAT
GTGTTCACCA GCATCGAAAA CGTTGAAGGA TCGGCCTATG CTGATACGCT GACGGGAGAC
ACCGGCGCCA ACGTGCTATC GGGCGGTGCT AGTGATGACG TGCTGGACGG TGGCACAGGC
AATGACGCCC TCTACGGCGG TGAAGGCAGC GATGTGTTCG TGTTCAACGC CAGCTATGGC
AATGATGTCG TTTTCGACTT CCAGGCCTCG TCGGACACAA TCGATCTGAC CGGCATGGGC
TTTGCCACCG TCAGCGATGC CGCCGCCTAT GCCAGCGAGA TCGAGGACGG CGTGCTGTTC
AACTTCGGCA ACGGGGATAC GCTGGCGGTG CATGGCTTGA GCTATGCAAG TCTGACATCC
AGCGACACAT TGATGTAA
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| Protein sequence | MATLTGDSGN NTLNGTTAAD TISGLAGDDI LNGSDGNDTL DGGEGADTLN GGAGTDTASY
ASSSAAIKIN LVTGTNTGGD AAGDTLTGID KIIGSDFNDT FTSNSEITLA GGKGDDTYVV
GNSNVSVSES TGAGSDTVRA SVNYTLSNYV ETLEYIGVGD FTGTGSAQDN TIIGGAGNDT
LIGKAGADIL NGGDGSDTAS YEGSAAVNVN LKTGVTFGGD AAGDTFTSIE NLTGTSSADT
LTGDDNNNVL NGGDGNDTLA GGNGADTLNG GNGADTLEGG EGADTLSGGI GTDTLVGGEG
ADTLTGSDGD DTLIGGEGAD TLSGGAGTNT ASYASSLAAI QINLVTGTNT GGEAAGDTLS
SIDKIIGSDF NDTFTSNSEI TLAGGKGDDT YVVGNSNVSV SESTGAGSDT VRASVNYTLS
NYVETLEYIG VGDFTGTGSA QDNTIIGGAG NDTLIGKAGA DILNGGDGSD TASYEGSAAV
NVNLKTGVTS GGDAAGDTFT SIENLTGTNN ADTMTGDDNN NVLNGGGGND TLAGGNGADT
LNGGDGDDSL VGGEGADTLN GGIGTDTASY ASSLAAIKIN LVTGTNTGGD AADDTLSGID
KIIGSDFNDT FTANSTITFA GGKGDDTYVV GNSNVSVSES TGAGSDTVRA SVNYTLSDYV
ETLEYIGAGY FTGTGNTQDN TIIGGAGNDT LIGKAGADIL NGGDGSDTAS YEGSSAVNIN
LKSNVATGGE AAGDTFTSIE NLTGTSNADT LTGNDNNNVL KGGDGNDTLA GGKGADTLTG
GNGDDTLEGG EGADKLDGGI GNDTLVGGEG ADTLTGSDGD DTFVGGEGAD TLSGGAGTDT
ASYASSLAAI KINLVTGTNT GGEAADDTLT GIDKIIGSDF NDTFTASSSI TLAGGKGDDT
YVVSQIATTT VLVEEASAGT DTVETTLTSY TLKTNFENLT HTDSTNFLGY GNSADNVIVS
QGGVDKLYGY AGNDTIRGGS GGDTIDGGDG SDTASYSDST AAVTINLLTK TISGGYATGD
VFTSIENVEG SAYADTLTGD TGANVLSGGA SDDVLDGGTG NDALYGGEGS DVFVFNASYG
NDVVFDFQAS SDTIDLTGMG FATVSDAAAY ASEIEDGVLF NFGNGDTLAV HGLSYASLTS
SDTLM
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