| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0126 |
|---|
| Symbol | noeK |
|---|
| ID | 7388300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 115395 |
|---|
| End bp | 116840 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643649856 |
|---|
| Product | phosphomannomutase |
|---|
| Protein accession | YP_002548074 |
|---|
| Protein GI | 222147117 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGA GGCTTGACCC TATGGCGGTA AAATTCGGCA CTAGCGGACT GCGCGGTCTC
TCTTTGGACC TGGTTGGCAG CGTTTCGGCT CTGCATGCGA CGGCATTTGC CAGAATGCTG
CTTGCCAAGG GCTATGCCAA GCAGGGCGCG ACCGTGCTGA TCGGCCAGGA TTTTCGCCCC
TCCAGCCCCG AAATCGCTGC CACCTGTATG GGTGCGCTGC AACGGGAAGG GCTGGTTCCG
GTCGATTGTG GGGCCATTCC CACGCCAGCG CTGGCCTTTT ATGGCAGTAA GATCGGTGCG
GCCTCGCTGA TGGTGACAGG CTCTCACATT CCTGCCGACC GCAACGGCAT CAAATTTTAT
CGGCCGGATG GAGAAATCGA CAAGGCTGAC GAAGAGGCGA TCACTGCACT TGCCGCTGAG
TTGGCGGCTG ATGAGGCCGC TAACCGCGTT GAGCATGGCA CAGGCGAAGA CCGATACGCG
ATTGCCGTCG ACCTGTTTCT GAAACGCAAT ATGGCTGTCC TGCCCCCTGC CGCCTTTAAG
GGCATGAAAA TCGGCGTCTA TCAGCATAGC AGCGTGGGGC GTGACATGCT GGTGACCCTG
CTTGAGGGCT ATGGCGCATC CGTCCTGCCG CTGGGGCGCT CGGAGATCTT TGTCCCTGTG
GATACCGAGG CGGTATCGCC TGAAACAATC GGCAAGCTTT CCGCCTGGGC AAGCGAGCAT
GGCCTGGATG CCATCGTCTC CACCGATGGC GATGCCGACC GTCCGCTGGT GGCCGATGAA
AAGGGCGCGT CCTTGCGCGG CGATCTGCTG GGGTTGATCA CTGCAAACCT GTTGGGCGCC
AAGGTGATTG CGACACCTGT TACCTCCAAT TCGGGCATTG AAGCCGCAAG CGGATTTAAG
GTCCTGCGCA CCCGTGTCGG CTCGCCTTAT GTGATTTCCG CCATGAATGC GGCGCTCTCG
GCGGGTGAAA GCGGCGTGAT CGGCTTTGAG GCGAATGGCG GCGTGATGTT GGCCTCCGAT
TTCACTGTTC ATGACGGCGG TCTTGCCGCT CTGCCGACCC GCGATTGCGT TATGCCTATC
CTGGCAGCGC TCTATGCAGC GGCCAGCACC GGACAGACAC TCTCCGCCGT GGTGTCAGAT
TATCGCCTGC CGATTGCCCT TTCCGACCGA CTGGAGCACT ACGCCTTGGA CAAAAGCAGT
GCGCTGATGG CATTTCTGCG CGTCTCGGAC GAAAACCTGA ACACCTTTCT GGCACCAATA
GGGACCGTGC GGGAAACCAG CGATATCGAT GGTTTACGGG TGACGCTCAG TGATAACAGG
GTCATCCATT TCCGCCCTTC CGGCAACGCC CCGGAAATGC GCTGCTATGT CGAGGCAAGC
GATCGGGCAT CGGCGGCCAG CCTGCTGGCC CAAGGTCTTG CCTTGCTGGC AAAATGGCCA
GATTGA
|
|---|
| Protein sequence | MTVRLDPMAV KFGTSGLRGL SLDLVGSVSA LHATAFARML LAKGYAKQGA TVLIGQDFRP
SSPEIAATCM GALQREGLVP VDCGAIPTPA LAFYGSKIGA ASLMVTGSHI PADRNGIKFY
RPDGEIDKAD EEAITALAAE LAADEAANRV EHGTGEDRYA IAVDLFLKRN MAVLPPAAFK
GMKIGVYQHS SVGRDMLVTL LEGYGASVLP LGRSEIFVPV DTEAVSPETI GKLSAWASEH
GLDAIVSTDG DADRPLVADE KGASLRGDLL GLITANLLGA KVIATPVTSN SGIEAASGFK
VLRTRVGSPY VISAMNAALS AGESGVIGFE ANGGVMLASD FTVHDGGLAA LPTRDCVMPI
LAALYAAAST GQTLSAVVSD YRLPIALSDR LEHYALDKSS ALMAFLRVSD ENLNTFLAPI
GTVRETSDID GLRVTLSDNR VIHFRPSGNA PEMRCYVEAS DRASAASLLA QGLALLAKWP
D
|
|---|
| |