Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_D0043 |
Symbol | |
ID | 8952430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_014000 |
Strand | + |
Start bp | 30123 |
End bp | 31148 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003541166 |
Protein GI | 292905295 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00122359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCCT TTGTCAGAAC TGATTTAAGA CTGTTCAACC TAATACCCCC TGATAATATC ACGACTCACA TTAGGCGTTG TGCAGCCGAC TTGCTCGGTA TGTTTCAAAA CTGGGCAACG AAAGAACAGC CAGGGTATTA CTTCAAGGTG AGAGTACAGG ATTTAGTTGA TTATCTTGGA GGACTATACG GCAAGGCAAC TGTCTCCAAA TCTGCAAAAT TACTTCATGA ATTGGGGCTA GTTCTACAGG AAAAGCACAA CAAAGACAGA CAAGTACACA CATACTACTA TAGATTTCAA AGCCAAGTCC TAGATAGGCT TTTGCAAAAT CAGCCTTCCC AAGAGCAAAT CGAATCATCC GATGCTCAAG TTGAACCTTC CGATGTTCAA AGTGAGGTTT TCACCTTATA TACAGATCCA CAGAAAACTG ATCAAGCATC TTTAGATCCA CCAACAAACG AGTGTGTGGT GGAAGCTGAA GAAGAAATGA GTGAGGAAGA AATTCAAGCG GCCATCAGCG CATCTCTTGG GGTAGTATTT GAACCCTCAC CACAAGAACA ACCCGCCGCA GATTCGGCAG ACACTGACTG CCAAATTGAG CAACCCAAGA AAAGCCGCGA CCTCACCCCA TTCTTCAACC GCCTGCGCGC CATCGATGTT CCCCTATCTG GGCAAATCCG CGAACTTCTT GTCAAAAAAC CAGAAGACCA ACTATCCCGC AACATCGCCG CCCTAGAAGA AGAAGCTGGC AAAAACGGGC TGAAAAACCC AATCGCCAGC GCTATTGCCG CCATCACTCG CAACTGGCAG CCGCGCATGG ATGCAGCTGC TTGGTGGGAG ACAGCAGCGC GAACGTGGGG ACGAGAGCGC CGGGATAGCT TGATTCAAAA CGTCAGCCGG CTTTTTTCTC CTTCATCTGG ACGGGAAGAG TTTTTTATCA TCTACAAAAC AGGAAAAATG CTCAAATTGT CTGAAGCCTA CAACATGAAC TGGGATGAAC TCGCCGCCTA TGGGGGTCAG TCATGA
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Protein sequence | MTSFVRTDLR LFNLIPPDNI TTHIRRCAAD LLGMFQNWAT KEQPGYYFKV RVQDLVDYLG GLYGKATVSK SAKLLHELGL VLQEKHNKDR QVHTYYYRFQ SQVLDRLLQN QPSQEQIESS DAQVEPSDVQ SEVFTLYTDP QKTDQASLDP PTNECVVEAE EEMSEEEIQA AISASLGVVF EPSPQEQPAA DSADTDCQIE QPKKSRDLTP FFNRLRAIDV PLSGQIRELL VKKPEDQLSR NIAALEEEAG KNGLKNPIAS AIAAITRNWQ PRMDAAAWWE TAARTWGRER RDSLIQNVSR LFSPSSGREE FFIIYKTGKM LKLSEAYNMN WDELAAYGGQ S
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