Gene Ava_D0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_D0043 
Symbol 
ID8952430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_014000 
Strand
Start bp30123 
End bp31148 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003541166 
Protein GI292905295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00122359 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCT TTGTCAGAAC TGATTTAAGA CTGTTCAACC TAATACCCCC TGATAATATC 
ACGACTCACA TTAGGCGTTG TGCAGCCGAC TTGCTCGGTA TGTTTCAAAA CTGGGCAACG
AAAGAACAGC CAGGGTATTA CTTCAAGGTG AGAGTACAGG ATTTAGTTGA TTATCTTGGA
GGACTATACG GCAAGGCAAC TGTCTCCAAA TCTGCAAAAT TACTTCATGA ATTGGGGCTA
GTTCTACAGG AAAAGCACAA CAAAGACAGA CAAGTACACA CATACTACTA TAGATTTCAA
AGCCAAGTCC TAGATAGGCT TTTGCAAAAT CAGCCTTCCC AAGAGCAAAT CGAATCATCC
GATGCTCAAG TTGAACCTTC CGATGTTCAA AGTGAGGTTT TCACCTTATA TACAGATCCA
CAGAAAACTG ATCAAGCATC TTTAGATCCA CCAACAAACG AGTGTGTGGT GGAAGCTGAA
GAAGAAATGA GTGAGGAAGA AATTCAAGCG GCCATCAGCG CATCTCTTGG GGTAGTATTT
GAACCCTCAC CACAAGAACA ACCCGCCGCA GATTCGGCAG ACACTGACTG CCAAATTGAG
CAACCCAAGA AAAGCCGCGA CCTCACCCCA TTCTTCAACC GCCTGCGCGC CATCGATGTT
CCCCTATCTG GGCAAATCCG CGAACTTCTT GTCAAAAAAC CAGAAGACCA ACTATCCCGC
AACATCGCCG CCCTAGAAGA AGAAGCTGGC AAAAACGGGC TGAAAAACCC AATCGCCAGC
GCTATTGCCG CCATCACTCG CAACTGGCAG CCGCGCATGG ATGCAGCTGC TTGGTGGGAG
ACAGCAGCGC GAACGTGGGG ACGAGAGCGC CGGGATAGCT TGATTCAAAA CGTCAGCCGG
CTTTTTTCTC CTTCATCTGG ACGGGAAGAG TTTTTTATCA TCTACAAAAC AGGAAAAATG
CTCAAATTGT CTGAAGCCTA CAACATGAAC TGGGATGAAC TCGCCGCCTA TGGGGGTCAG
TCATGA
 
Protein sequence
MTSFVRTDLR LFNLIPPDNI TTHIRRCAAD LLGMFQNWAT KEQPGYYFKV RVQDLVDYLG 
GLYGKATVSK SAKLLHELGL VLQEKHNKDR QVHTYYYRFQ SQVLDRLLQN QPSQEQIESS
DAQVEPSDVQ SEVFTLYTDP QKTDQASLDP PTNECVVEAE EEMSEEEIQA AISASLGVVF
EPSPQEQPAA DSADTDCQIE QPKKSRDLTP FFNRLRAIDV PLSGQIRELL VKKPEDQLSR
NIAALEEEAG KNGLKNPIAS AIAAITRNWQ PRMDAAAWWE TAARTWGRER RDSLIQNVSR
LFSPSSGREE FFIIYKTGKM LKLSEAYNMN WDELAAYGGQ S