Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_D0012 |
Symbol | |
ID | 8952399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_014000 |
Strand | - |
Start bp | 7797 |
End bp | 9923 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003541135 |
Protein GI | 292905264 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTAG AGAACATCAT TCAGGCAGTT GTAAATCGTG ACGGCAATGG CGGCGGCGAA TCGCTGATTG TTGCCAATCA TCTTGCTCAG TTGAAATTGT TCGGTGCCAG GGGAATCGAA CTTTACCCGG TGCAAGACCC CACTGGAGAG AGAAAGAAAT TTATCTCCAG TATCTGGAAG TACAACCGGA TGGATCTTTA TTTGGACTAC ATCTGGGACT TGTACCTGAC TTGTGGCGAG ATTCTTTTCT ACCTGCGTCC CACTGGTGAT AGTTATGAAA TCTCATGGTT TCATGGGGGG ACAACCGACC CCAACCCAGA GTATAAAGCC TACTACAAGC CAGGGGGTAG GGAACTAGAA AGGGTAGTGA TTGCCTATCC CTACAAGCGG CTTTCGCTGC TGGGGACGGA AGAAGAACGC TGGGTGAAAC TGGAAATTAC TAAAGAGACA ATCCGCCAGC ATGATTTAAC ACAAAAGCCT AATCTCAATG GGATTACGGG TGATATCGAT CTGCAAGACC CTAATGTACA AACTGTAGAG AACACCTTGG GGTTTATTCC CTGTGTGGCT ATCCCCAATC ATCCCAGCCG TCCCGGTCAA CCAGGGTCAA GTGAGTTTCA TTGGTTGCGT CAGCCGATTG AGCGTCATGA CAAGATGCTG ACGACTATCA ATAGAAACTT GTCGCTGTTT GCCAATCCTA CATTGGTGAC GACGCGATCG CGCTCTGAGG TTTTGGAAGC TGCTGCTGTA TCAGGTTTTG TTCCCACAGT TGCATCTCAG TCTGGGTACT ATCCCAGCAC GAACAGGTCA GACCCCAGGG AGCGCAGTCA GTTTGATGGT GGTGAAAAAG TCGCCAGTGT GATTGGTGGT ATTGGGCCTG ATGAACGGGT GGGATATATT CAGGTTGACC CGGTGAGTGG TGATCAGAAT TTATATCAAC GGGAATACCG TGAGCAACTA CACACAGCTT TGGGTGGTGT TGATCCGTTG GGGATTCGTT CTGGTGCGAC GGCATATGAA ATCAAAGTAA GAAGTGGTTC AACTGCGGCG ACTGCTAGGA AAAAATGTTT GGCTTTGTAT GACTATGGAC TGTGCAAACT GTTTGAGATG ATTCTCTTGG CTGAGGAGAA TCTGTTTAAA CAATCTCTAT TTGCAGTAGC AATTGAGCAA GAAAAAGAAT TTAAAGGCTT ACTGGCTGAC ATCTACAAAC AACAGGGAGC CAAGCTCAAG CCCAAAGACA TTCAACTAGA GTCACCCAAC GACATCACAG ACGATATCTG TCAGATGCTG TTGGAGTTTG GCGTTATCCC TCGCGGTGTG ATTGGGATGC CACCGATGGG GGACAGAGTA ATTGAATGGA GGTTCACCAG TGAAATTTTC CCAGACACTT CACGGGAAAT TTTGGATAAG TCGATTGTGG GACGGAACTT GGCAGAGGCG GGGATTAATA CTGAGTACGT TTTACGCTTT CTTTTTCCCG ACAAAACCGA TAAAGAAATC GCCGCGATGC AGAGTGGGAA TTTTAGCTAT AGAACCACTC AAAACAAAGT TCAAGCGATT AATCAACTCA TAGGTTTATA TCAAAACTTT TTGAGTCTCC CTGACCCGCT TGATCCGGCG ATGCCCTTGG GGTGGCGATT GGATATCACC CCACTAATCG AAAAAGCTTT GTCGTTAGTT GCCCAAGAGT TTTCTTACGG TGAGACTTAC GACGAACCCG ACAAACTCAA TAGCCCTACC ACAACTAATG GCAATGGCTC TAACTCATAT AACGATGTAA CAACAAATGG TAGCAGCCCC CCAAGCGACA CCAACCCCGG CATTTATACC CCAAGGGACG AGCGCGGCTC CACAGCCGCC GCAGGACTCC CAACACAGTT CCCAGGAGTG GGGACAAGTT ACCAACCGCC TGTTGGATAT CGTTCAAGGG CGGATTGGGG CAATCCCCTC CCCACCCCCG GCGGTACAGT CACCAATTCC GTCCCACGTC TACCAACAGG ACAGCAGCCA AGCAATTTCT ATCCCCCAGG GCTTCCAGCA GACATCGCAG TCTCCCCAGA ACTTTGGGGT ATCTTCGCCC AACAGCAACA GACAGGCAAC AGCCAACGCT CTAGGGGTAA GCGCTAA
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Protein sequence | MTLENIIQAV VNRDGNGGGE SLIVANHLAQ LKLFGARGIE LYPVQDPTGE RKKFISSIWK YNRMDLYLDY IWDLYLTCGE ILFYLRPTGD SYEISWFHGG TTDPNPEYKA YYKPGGRELE RVVIAYPYKR LSLLGTEEER WVKLEITKET IRQHDLTQKP NLNGITGDID LQDPNVQTVE NTLGFIPCVA IPNHPSRPGQ PGSSEFHWLR QPIERHDKML TTINRNLSLF ANPTLVTTRS RSEVLEAAAV SGFVPTVASQ SGYYPSTNRS DPRERSQFDG GEKVASVIGG IGPDERVGYI QVDPVSGDQN LYQREYREQL HTALGGVDPL GIRSGATAYE IKVRSGSTAA TARKKCLALY DYGLCKLFEM ILLAEENLFK QSLFAVAIEQ EKEFKGLLAD IYKQQGAKLK PKDIQLESPN DITDDICQML LEFGVIPRGV IGMPPMGDRV IEWRFTSEIF PDTSREILDK SIVGRNLAEA GINTEYVLRF LFPDKTDKEI AAMQSGNFSY RTTQNKVQAI NQLIGLYQNF LSLPDPLDPA MPLGWRLDIT PLIEKALSLV AQEFSYGETY DEPDKLNSPT TTNGNGSNSY NDVTTNGSSP PSDTNPGIYT PRDERGSTAA AGLPTQFPGV GTSYQPPVGY RSRADWGNPL PTPGGTVTNS VPRLPTGQQP SNFYPPGLPA DIAVSPELWG IFAQQQQTGN SQRSRGKR
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