Gene Ava_C0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0214 
Symbol 
ID3678134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp250393 
End bp251235 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID637715294 
Producthypothetical protein 
Protein accessionYP_320488 
Protein GI75812871 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000169734 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTC CTACACCTGT GCGAAATAAA CAACCAAGTC GAAGAAGACA AAAGGTAAAT 
GTCACCCTGT GGACGGTTTG TTCGACTGTT AGTGCGCTGT CTGTTATCGG GGCGGTTGCA
TTAATGGTTG GATGGAAGCA ACAAATTCCA GGTAATCAGA TATCGGAGGT ACAGCAAGTA
AAGGCGCAAG TTGCCCAAAT TCGAGAAGTG TACTTAGAAA AGCTTTCCCG TACTGACTAT
AATATAGACC ATCTGTCCAG TTACTCCTCA GTAGAAGGTG CGCCTACTCT TACAGGCTGG
CGACAGTTAG CGGCGGCATT GTGGGGACAG CAATTGCGGG GTGAAATATC CAGAATGCAG
GCTAATGAGA AATCTGGGTT TTACCGCCTT CATTATATGC CGGCACTGGA GATAGTTAAA
TTCAACTCGC TGGATGTTTT ACTAGAAGCG GCTTCTGGAA ATAATAGTTT TTATTGGGGA
TACCGCAAAA CCGATGGTAC GAAAGTTGAG GAGAAGATAC CAACCGGGGC TGCTGCTGTT
TTGATCTTGG GTAAATTAGA GGCGATTGAT TACGCCCAGA ATTTGGAATC TCAACCATCG
GTCGATCTGA ATCAAATGCT AATTCAGATT AGGAATGCTC AAGAACCATA CTCTCTTGCA
CAGGCGCAGC TGTTACGGGC GCGGGGGTAT TTAGACCCAG TAGAGCAGAT GGCACAGGTG
GCAGACATCC GCGAGAAAAT ACGCCAGAAA GAGGAGGAAA GGCGAATATA TCTCCAACAA
ATGAAGAAGC AATTACCTAA TCCAATTCCT AATAGAAAGC CTGTTAATAA ATCAGGGGAG
TGA
 
Protein sequence
MFTPTPVRNK QPSRRRQKVN VTLWTVCSTV SALSVIGAVA LMVGWKQQIP GNQISEVQQV 
KAQVAQIREV YLEKLSRTDY NIDHLSSYSS VEGAPTLTGW RQLAAALWGQ QLRGEISRMQ
ANEKSGFYRL HYMPALEIVK FNSLDVLLEA ASGNNSFYWG YRKTDGTKVE EKIPTGAAAV
LILGKLEAID YAQNLESQPS VDLNQMLIQI RNAQEPYSLA QAQLLRARGY LDPVEQMAQV
ADIREKIRQK EEERRIYLQQ MKKQLPNPIP NRKPVNKSGE