Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0214 |
Symbol | |
ID | 3678134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 250393 |
End bp | 251235 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715294 |
Product | hypothetical protein |
Protein accession | YP_320488 |
Protein GI | 75812871 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000169734 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0128951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTC CTACACCTGT GCGAAATAAA CAACCAAGTC GAAGAAGACA AAAGGTAAAT GTCACCCTGT GGACGGTTTG TTCGACTGTT AGTGCGCTGT CTGTTATCGG GGCGGTTGCA TTAATGGTTG GATGGAAGCA ACAAATTCCA GGTAATCAGA TATCGGAGGT ACAGCAAGTA AAGGCGCAAG TTGCCCAAAT TCGAGAAGTG TACTTAGAAA AGCTTTCCCG TACTGACTAT AATATAGACC ATCTGTCCAG TTACTCCTCA GTAGAAGGTG CGCCTACTCT TACAGGCTGG CGACAGTTAG CGGCGGCATT GTGGGGACAG CAATTGCGGG GTGAAATATC CAGAATGCAG GCTAATGAGA AATCTGGGTT TTACCGCCTT CATTATATGC CGGCACTGGA GATAGTTAAA TTCAACTCGC TGGATGTTTT ACTAGAAGCG GCTTCTGGAA ATAATAGTTT TTATTGGGGA TACCGCAAAA CCGATGGTAC GAAAGTTGAG GAGAAGATAC CAACCGGGGC TGCTGCTGTT TTGATCTTGG GTAAATTAGA GGCGATTGAT TACGCCCAGA ATTTGGAATC TCAACCATCG GTCGATCTGA ATCAAATGCT AATTCAGATT AGGAATGCTC AAGAACCATA CTCTCTTGCA CAGGCGCAGC TGTTACGGGC GCGGGGGTAT TTAGACCCAG TAGAGCAGAT GGCACAGGTG GCAGACATCC GCGAGAAAAT ACGCCAGAAA GAGGAGGAAA GGCGAATATA TCTCCAACAA ATGAAGAAGC AATTACCTAA TCCAATTCCT AATAGAAAGC CTGTTAATAA ATCAGGGGAG TGA
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Protein sequence | MFTPTPVRNK QPSRRRQKVN VTLWTVCSTV SALSVIGAVA LMVGWKQQIP GNQISEVQQV KAQVAQIREV YLEKLSRTDY NIDHLSSYSS VEGAPTLTGW RQLAAALWGQ QLRGEISRMQ ANEKSGFYRL HYMPALEIVK FNSLDVLLEA ASGNNSFYWG YRKTDGTKVE EKIPTGAAAV LILGKLEAID YAQNLESQPS VDLNQMLIQI RNAQEPYSLA QAQLLRARGY LDPVEQMAQV ADIREKIRQK EEERRIYLQQ MKKQLPNPIP NRKPVNKSGE
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