Gene Ava_C0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0129 
Symbol 
ID3678065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp158476 
End bp158727 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content45% 
IMG OID637715212 
Producttransposase 
Protein accessionYP_320406 
Protein GI75812789 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTTAC ATCCCGAAGA ACTTCCTCCT ATTCCTGATG AAACGGTACG TGTAGCCAAA 
GCCGCGTTCC CCAAAGGTAA TTTATATATG CGACTGCGTG ATGAACTTGG AGTCTTTTAT
AAGGATGAAG ATTTCGCATC ACTGTATCCA CAACGGGGTC AGCCAGCGCA AGCACCTTGG
CGGTTGGCGA TGATACTGGT GATGCAATAT CTAGAGAATT TATCTGATAG ACAAGCAACT
CTTGCAGTGT AA
 
Protein sequence
MCLHPEELPP IPDETVRVAK AAFPKGNLYM RLRDELGVFY KDEDFASLYP QRGQPAQAPW 
RLAMILVMQY LENLSDRQAT LAV