Gene Ava_C0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0038 
Symbol 
ID3678114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp59185 
End bp60336 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content45% 
IMG OID637715122 
Producthypothetical protein 
Protein accessionYP_320316 
Protein GI75812699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.818872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAC ATCTTGTAAT TGCAACCGAC CCATTCTTCG GGCAAGACAT TTTAGAAAAT 
GCGTCAGCTG GAGCGCAATT AGTAGCAGAA GGTTTCAATG AACTTTGGCA AGAAACCCTC
AACGGTAACT TGTACGGCTC CATGTGCAAA GTTGGTCAGT TTTTTGCGAT CGCTACACTC
ACCCTTTTTA TGGTTGAGTT AGGCAAAAAC TGGATAAATC AAGAAGATAT GAAAGCTCTC
TCCAGTTTGA TATGGCCCAT TCTGGTGATC GGACTACTAG CTAACAATGG CACTTTACTT
AGAAGTGGAA CACTTGCCAT CCGGGGATAC ATTAATACTG TTAATAATGA CATCCTGGAA
TTTACTGCTG CCGGAGCCAA CCTAGAAGTA GCATTCAACC GCGCAGTCGG CAATATTGCC
CTCCAGCAGC AAGTAGGGGC GGCAATGGAA AGATGCCGCT CCATCCCTGG TAACACGCAA
GATTCAATCA CCTGCTTGCA ACAAGCAGAA GCAGAACTCA AAACCTCTGC GCCCGATCTA
TTTAAAGGAG AAGCCCCCGA TAGCGGTAGT TGGGAATTTA ACCCACTTCA GGCTTTATCT
GATGCTAAAG ACGCGCTCGA AAATCTCTCC CCTGGTCAAA TCGCCGAAAA GATTGGTAAT
ACTATCACCA GTACAATCGG TTCGATGATT ACTGGATTTG TCGCAGTTAT CCTCCTCGCC
CTCAATAACG CTTACCAATG GGGTATAGAA TTCACGATGC TTTTAACTGC CCTACTTGGC
CCGTTGGCAA TAGGCGGTTC GCTACTCCCC TTTGGCGCAA AACCTATTTT CGCTTGGCTA
ACTGGTTATT TCACCGTTGG AATGGCGAAA CTCTGCTTCA ACATGATTAT TGGTTTGTGC
GGACAACTTA TCGCTAATTC CGAACAAAAT CAACCGATGA TATTTCTGCT TTTTGTTGGG
TTAGTTTCTC CTATCCTTGC ATCTGCATTA GCCGCAGGTG GTGGAATAGC TGTTTGGACA
GGATTAGGTA AAACAGTAGC ATTTGGCTCT GAAATTGCAG CAGGAATCGC TACAGGTGGA
GCAAGTACAA CTGCTACGGT TGCTGTCAAT GCCACCAAAT TTGTTAGTTC CAAAATCAAA
GTTAAAAAGT AA
 
Protein sequence
MLEHLVIATD PFFGQDILEN ASAGAQLVAE GFNELWQETL NGNLYGSMCK VGQFFAIATL 
TLFMVELGKN WINQEDMKAL SSLIWPILVI GLLANNGTLL RSGTLAIRGY INTVNNDILE
FTAAGANLEV AFNRAVGNIA LQQQVGAAME RCRSIPGNTQ DSITCLQQAE AELKTSAPDL
FKGEAPDSGS WEFNPLQALS DAKDALENLS PGQIAEKIGN TITSTIGSMI TGFVAVILLA
LNNAYQWGIE FTMLLTALLG PLAIGGSLLP FGAKPIFAWL TGYFTVGMAK LCFNMIIGLC
GQLIANSEQN QPMIFLLFVG LVSPILASAL AAGGGIAVWT GLGKTVAFGS EIAAGIATGG
ASTTATVAVN ATKFVSSKIK VKK