Gene Ava_B0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0344 
Symbol 
ID3677541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand- 
Start bp362276 
End bp362947 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content42% 
IMG OID637715047 
Producthypothetical protein 
Protein accessionYP_320241 
Protein GI75812622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00746035 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAGC TTCAAACCAA CAACACTGCA CTTAGTACCC AACAGTCAGC AGAGATGAAA 
ACTACAAGAC TGTTAAAAGT GCTAAAAATA ATGTTTCCTC GTGAAAACTG GACTAGTCAG 
AAGTTAACTA GCGAAGTCAA TGTTAAGGGC AGTGGTGTTT ACAGGTTTGA GCATGGAACT 
ATAGCTCACC TTGGGCAACC CGGTGGCCCC CGCACTGAGC ATCTTTGGGA AATGACTGTA 
GATCGAGTAT GGGCTAAGGC GTTAATTGAG GCACACAATC AAGCCCAAGA ATCTGAGGCT 
TTAGTTAGAA CTCAGGCTGA AGTTTACCCA AAAGATTGGT ATGGTTTACG TTTACGCTCC 
CCGGCTGAAG CTGCGATCGC AGAAGCTTTG CAAACAAAAG GGGTACTGTT TTTTGTGAAT 
ACTGGCTGTC GATTACATAA TCACTCAAAA CAGTATGAAA CTAGAGAAGT TGATTTTTTA 
GTTTTTCATC AAGGTAAAGT CAGGATTTTA GAAGTTGACG GCATCACATA CCATCAAAAC 
CCATTAGCTG ATTACAAGCG AGACAGGTTA TTTGATAGAG AGGGTATTAG AACCAGTCGA 
TTTAGCGCAC AGGAATGTTT TGAAAATCCT AACGGGGTTG TTGAGGAGTT TTTAGGGTTG 
TTTAAATTTT AA
 
Protein sequence
MPQLQTNNTA LSTQQSAEMK TTRLLKVLKI MFPRENWTSQ KLTSEVNVKG SGVYRFEHGT 
IAHLGQPGGP RTEHLWEMTV DRVWAKALIE AHNQAQESEA LVRTQAEVYP KDWYGLRLRS 
PAEAAIAEAL QTKGVLFFVN TGCRLHNHSK QYETREVDFL VFHQGKVRIL EVDGITYHQN 
PLADYKRDRL FDREGIRTSR FSAQECFENP NGVVEEFLGL FKF