| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0282 |
|---|
| Symbol | |
|---|
| ID | 3677568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007410 |
|---|
| Strand | + |
|---|
| Start bp | 302724 |
|---|
| End bp | 306029 |
|---|
| Gene Length | 3306 bp |
|---|
| Protein Length | 1101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637714988 |
|---|
| Product | Type III restriction enzyme, res subunit |
|---|
| Protein accession | YP_320182 |
|---|
| Protein GI | 75812563 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.395373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGC TTGGCTCATT AGTGCAGTCC TCAAATAATA CTTTGGGGAC AGGTAAAGTA
ATTGAAGTAT CTGGTGGCAG TATTGTTGTT GAGTATTTTA GTACCATAGG ACAGCGCTGC
CAAAAAACTT TATCCTTGCA ATCGTTGTCT GGGGTTATAC TAAGACCTCA AACGCGATGT
TATGTTCAAT TAAAAGAGCA AGATAAATAT AAATGGGTAA TTGGCAGAAT TTCTGGATGG
GATGAAGACA TCCAAAGGTA TGAAATTGAT TTGCCAGGGC AGAAATCTAT AATTAAATCA
GAACAAGAAG TTTATGTCCG TTGTAATTTA ACAATAAAAG ATCCGGTTGA AACACTAGCA
ATCAAGGCAC ACGAAACCCC CTACTTACAC GACAGAAGGT CAGCTTTAGT TAAATGCTTA
ATCCAGCAGA GGGCTGTAAG TCGTGGGATG AGTGGACTAA TTTCATCCAA TATTCATCTT
TACCCTCATC AAGTAGAAGT CATCAGGCAA GTATTACAAG ATTCAGTTCA ACGCTACATA
TTAGCTGATG AAGCCGGACT GGGAAAAACT ATTGAAGCTG GTGTAATTCT GCGCCAATAT
CTACTTGATG AGCCAGAAAA AAAAGTAGTA GTCTTGGTTC CAGGGAAATT ACTACAACAA
TGGAAAAATG AGTTAGAGAA TAAATTCTAT ATTTCTTCGT TTCCTACAAG AGTAGTAGTG
CTGGCATACG AGGATTCGTC CAAAATTAAT GCACAGAAAA ATATTGGCTT GCTAATTTTG
GATGAAGCCC ACCACATTGC CGCAATGGCT AATTCCCAAG ATAGCAAACT ACGCCAGAAT
TTTGAAATCT ATAAGTATCT AGCCCATAGA AGCGAACACT TACTTTTACT ATCTGCAAGT
CATATTCTTC AATGTGAGCA AGAGTTACTA GTCCTGCTGC ATTTACTTGA GCCTAAAATT
TATCAACTCA ATAATCTAGA AGATTTTCAG CTAAAAATTA ATAAAGATAA ACTGCTAGCT
CAACTTATCT CCTCATTAAT AAATGAGGAA AATACTTCTA ATGTCCACAA TGGTTTAAAG
CAATTACAAA CATTATTACC CGAAGACAAG TATTTATTAA CTTTATTAGG TAAATGGGAA
GATGGCTTAA ACACTGATTC GTCTGCTCAT ACTAAAACCC TTAAAGAAAT TTGCACGTAT
GTTAATGAAA ACTATCGACT GTATCAGCGA ATACTGTCTA ATAGTCGTGC TTGTCTAGAA
GATGACACAT TTAGGCGCAA TATTACACCC AAGGAAGAAT ATGATTTAGA TGAGCGATCG
CCTGATATTC ATGAATTGCT AGAGAAATGG CGTACTATTG CACCCAAACA AGAAGCTTAT
CAACGCATTT TCCTACTGTT GTTCTTAGCT TCTGGTACGT GGTTAGGTAT TTTAGAGCGA
GTAATAGCCG CACGCCAGAG TGGAGTGCGT CATCCATTGC TACTTAAAGA GTTTAGTAGT
AATGATATCA ATCTTTTAAC TGAAACTCCC AAGTTTGAAG GTGAAGAAGA GGTTTTAATC
TCTTTACGCC AAATTATTAA TCAACCTTCA GAAGACGGAG ACCGGATTGA ACTATTAAAA
ATCATCATTC TCTACCGCTT ATCAGAAATT TTTGGTTTGC AATCATTTCG CAGCGACCTT
AGCAAACTAA GCGAGAGAAT CCGGCAGAGA ATTTCTAGAC CTATTCCTGG TGATTATTTG
CCAAAGATAT TGATATTTAC CAGTTTTGGA CAAACCTGCT TAGAAATCGC TCGTTCACTA
GCAAATGCTT TTGGTACAGA AACTATTGCT GTCCATCAAT CAGAACAAAG TTGGGGAGAA
ATCGAGAAAA ACTTACAGCA GTTTTACAGT AATCCTAATT GCTTTATCCT CATCTGTGAT
GCTTCTGCAC AAGAAGGTCA TAATTTTGGA TTTGTTGATT GGGTAATTAA TTTTGACTTC
CCTTGGCAAC CACATCAATT AGAACAGAGA ATTATTAGAT TCGACCAAAT TGGGCGTTCT
AAAAATATTG ATTTTACCGT ACTAGTTGGC GCTGATTTAG ATGATAGTTT TCATTATGCT
TGGTATCAAC TTTTAAAGGA TGGATTTTCC ATTTTTACTG AGTCTATAGC TAGTTTCCGA
TTAGATAATG AATTATCACA TCTAGAACAA AGCTTGTTTC AACTAGGCGC TATTGGTTTG
CTCAAACAAG TAGAATCCAT CAAAAACACA ATTGCTCAAG CACAATCCCA GGTGATTGCA
GAGCATAAAC TAAATAAGGC TCTGCTTGGA GAGAATGACG ATACATTTTT TCCAGAGCTA
GATAGTTACG ATCTTAATCA TCTGGAAATT AAACGAGCTA TAGAAGGTTG GATTGATAAT
TCACTAAAAT TCAAATCTGT GTATCACCCA GATTTAGCAA ATGTCAAGTA TTATCAAGCA
ACTAAGTATA CTTTAGTACC TCTCAACGAG TTGAAATCTT GCTTTATCCA TAGCAATCTC
AACCAATTTG GTACTTATGA CCGCCAACTA GCAAACCACA ATCCTGGTAT CAAACTTTTT
CGTATAGGAG AAGGGTTGGT AGATGCACTT TCCAGATATA TAGAATGGGA TGATCGGGGT
CAAGCTTTTG CTCTTTGGCG ACAAGACTCA TCTTGGGACA GTCGTGGGGG AATGGAATGG
TTTGGTTTTC AATGTAATTA TTTAGTTGAA TTTAATCTGG AAAAAGTCAA GCAGATTTTT
ACCGATTATC AACTTGATAA TTCTCGGTTT AACGTCTTAA AGCGTCAGGT TGATGCTTTA
TTTCCACCAT TGATTGAAAC TATCTTTATT GATGCTCGTT CCCAAATGCT CCGTGAAGTT
CAGGATGAAT TACTCTTGAG TATATTACAA CGCCCATATC AAAAAGATAA AACCTCTCAT
GGAGTACAAG ATCATAATCT TGCTAAAGAA CGTTTAGGAA TCATTGACAA TTTTATTGCT
CCTACTAATT GGGAGCAAGT TTGCCAGGAA GTTAGTAATA TATCAAGGAG ATTACTCGCC
CAACGTCAAC ACTTGATTCA ACGATGTCAA CGTTATGCTC ATTTAGCAGA GCAGAAGTTA
GCTCCTAAAA TAGAGCAGTT AAGTTTACGC TTGAATACAC AAACTTGGGA TAATACTCTA
GCTGAGGAAT TGAAAATCGA AAGGCTTTTG AAGTCTGCTA TTGTCCAAGG TATCTATCAA
CCACAACTTC AAGTTGATTC TGTTGGTTTT ATTGTGATAT CTGCTCATTC TCCTGCCCAT
TTTTAA
|
|---|
| Protein sequence | MIKLGSLVQS SNNTLGTGKV IEVSGGSIVV EYFSTIGQRC QKTLSLQSLS GVILRPQTRC
YVQLKEQDKY KWVIGRISGW DEDIQRYEID LPGQKSIIKS EQEVYVRCNL TIKDPVETLA
IKAHETPYLH DRRSALVKCL IQQRAVSRGM SGLISSNIHL YPHQVEVIRQ VLQDSVQRYI
LADEAGLGKT IEAGVILRQY LLDEPEKKVV VLVPGKLLQQ WKNELENKFY ISSFPTRVVV
LAYEDSSKIN AQKNIGLLIL DEAHHIAAMA NSQDSKLRQN FEIYKYLAHR SEHLLLLSAS
HILQCEQELL VLLHLLEPKI YQLNNLEDFQ LKINKDKLLA QLISSLINEE NTSNVHNGLK
QLQTLLPEDK YLLTLLGKWE DGLNTDSSAH TKTLKEICTY VNENYRLYQR ILSNSRACLE
DDTFRRNITP KEEYDLDERS PDIHELLEKW RTIAPKQEAY QRIFLLLFLA SGTWLGILER
VIAARQSGVR HPLLLKEFSS NDINLLTETP KFEGEEEVLI SLRQIINQPS EDGDRIELLK
IIILYRLSEI FGLQSFRSDL SKLSERIRQR ISRPIPGDYL PKILIFTSFG QTCLEIARSL
ANAFGTETIA VHQSEQSWGE IEKNLQQFYS NPNCFILICD ASAQEGHNFG FVDWVINFDF
PWQPHQLEQR IIRFDQIGRS KNIDFTVLVG ADLDDSFHYA WYQLLKDGFS IFTESIASFR
LDNELSHLEQ SLFQLGAIGL LKQVESIKNT IAQAQSQVIA EHKLNKALLG ENDDTFFPEL
DSYDLNHLEI KRAIEGWIDN SLKFKSVYHP DLANVKYYQA TKYTLVPLNE LKSCFIHSNL
NQFGTYDRQL ANHNPGIKLF RIGEGLVDAL SRYIEWDDRG QAFALWRQDS SWDSRGGMEW
FGFQCNYLVE FNLEKVKQIF TDYQLDNSRF NVLKRQVDAL FPPLIETIFI DARSQMLREV
QDELLLSILQ RPYQKDKTSH GVQDHNLAKE RLGIIDNFIA PTNWEQVCQE VSNISRRLLA
QRQHLIQRCQ RYAHLAEQKL APKIEQLSLR LNTQTWDNTL AEELKIERLL KSAIVQGIYQ
PQLQVDSVGF IVISAHSPAH F
|
|---|
| |