Gene Ava_B0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0204 
Symbol 
ID3677750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand- 
Start bp226884 
End bp227528 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID637714911 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_320105 
Protein GI75812486 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG CAAGAGAAGC CAGCAGAGCA ATTCGTTCTA CTATCGTTCT TTGGGTGATT 
AGCGCAGTTA TTTATCCGTT TGTGATGATT GCGTTTGGAC AAATTGTGTT TCCATCTCAA 
GTAAATGGTA GTTTAATCCG AGATAGTCGG GGTCAAATTG TGGGTTCTAG TTTAATTGGT 
CAACCATTTA GTAGCGATCG CTATTTTAAC TCCCGTCCTA GCACCACCAG TTACAGCACC 
GCCGACCCCA AAAAAGATGA GGCTAAAGTC TTACAAACAG GAGTCTCCGG TGCAAGTAAC 
CTCGCTCCTA GTAATTCAGC TTTAATAGAA CGCATCAAAG GTAAAGATGA CCCAGATCCC 
AGCAAACGGG TAAAAGGCGA TTTGAACCGA CTCAAAACAG CAGGTGTCCA ACCTACCGCA 
GATTTAGTTT ACACCTCTGG TTCTAGCCTT GACCCCCACA TCACCCCTGA AGCTGCCAGA 
GCGCAAATTA CTCGTGTAGC CAAAGCGCGA GGAGTCCAAC CCCAACAGTT AGAAACTTTA 
ATTAATCAAA ATACTGATGG TCGCTTTCTA GGACTATTTG GTGAGCCTGG GGTTAACGTT 
TTGAGGTTAA ACCTTGCTTT AGATTCATTA AAAGCTGCAA GTTAA
 
Protein sequence
MSFAREASRA IRSTIVLWVI SAVIYPFVMI AFGQIVFPSQ VNGSLIRDSR GQIVGSSLIG 
QPFSSDRYFN SRPSTTSYST ADPKKDEAKV LQTGVSGASN LAPSNSALIE RIKGKDDPDP 
SKRVKGDLNR LKTAGVQPTA DLVYTSGSSL DPHITPEAAR AQITRVAKAR GVQPQQLETL 
INQNTDGRFL GLFGEPGVNV LRLNLALDSL KAAS