Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_A0031 |
Symbol | |
ID | 3677982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007411 |
Strand | + |
Start bp | 32042 |
End bp | 33127 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715083 |
Product | phage integrase |
Protein accession | YP_320277 |
Protein GI | 75812659 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTTA CTAATATTGA GGTTAGCTCC GTAGAAATTC TTTCTCTCAA CCCTGTTAAG GTTGTAACGT CAAATACTTC GCAACAAGTA ACTCCAGAAT TGGTAGAGGA GGTAATCAGG CAATATTATT ACCGCACACC TGCCGTAAAT AATGATGAAG AGTTAATCTT AGCTTGGGCT GGCAGTCAAA ACCGGGAACA AACTAAGCGA AAATACTATC GTTTTGGTCA AAAATTACTA GATTGGGTTC GTCATCAAGG AATACCTGAT TTAAGATTGC TACAGCAGCC AAAGCTACTT GAATTTATTG CCTCTTGGGG TGAGGTTTCC CCTTATACTA AATCTAACCA GATTTTGATG CTACGGTCGC TGTGGAGTTA CGGATCTGCT GAGAATATTG GCTATTTTTT GCGGAATATT GCTAGTACCA TAAATTACGA TAATTTCAGT AATTTACCCA AAGCAGAGCG TTATTTAGAA GATTGGGAGA TGGCGAAACT TGCTGATGCT GCCAAGCAGT TGAGTGGGAA GCACTGGCTG GTTTTTTGTT TGCTTTTTTA TAGTGGAATG CGGGTAGGTG AAGTGGGTCG GGTGACAGTT CCAGGTGATG AAGCAGGTAA ACCGAGGGAA GATTTTCCGG GTTTATATTG GCACAACTTT AAATGGCAAT TTGACCCAGC GACGGATGAT AGGCAACGTG GATATTACAC TATCAAGTTT CGGGGTAAGG GTGGGAAGTA CCGAGAAATT GGGTTGGACT ACGAGACTTC TAAGTTGCTA AAAAAATACC GGGGGATGGC TAGTGACAAG ATGCCAGTAT TTCCCAATAT GTCGCCTGAC CCTAAAAAAC GGGGGTTGCC GTTAAGCGAT CGGGCGATTA AAAGGTTGAT TCAGGATATC TCTGAGGTGG CGAAGGTAAA GTTTTCTTGT CACTGGCTAA GGCATTCCCA CGCAACGAGG GCGGTTGATA GTAAACCACT GTTTGAGGTG CAAGACCAGT TGGGGCATAG TAAGAGTGAC ACTACCAAGA CGTATGTTCG CCCCAAAAAG GATGCAGGGA CAGGTACTAT TTTGCCGAGG TTTTGA
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Protein sequence | MDVTNIEVSS VEILSLNPVK VVTSNTSQQV TPELVEEVIR QYYYRTPAVN NDEELILAWA GSQNREQTKR KYYRFGQKLL DWVRHQGIPD LRLLQQPKLL EFIASWGEVS PYTKSNQILM LRSLWSYGSA ENIGYFLRNI ASTINYDNFS NLPKAERYLE DWEMAKLADA AKQLSGKHWL VFCLLFYSGM RVGEVGRVTV PGDEAGKPRE DFPGLYWHNF KWQFDPATDD RQRGYYTIKF RGKGGKYREI GLDYETSKLL KKYRGMASDK MPVFPNMSPD PKKRGLPLSD RAIKRLIQDI SEVAKVKFSC HWLRHSHATR AVDSKPLFEV QDQLGHSKSD TTKTYVRPKK DAGTGTILPR F
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