| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_A0006 |
|---|
| Symbol | |
|---|
| ID | 3677977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007411 |
|---|
| Strand | - |
|---|
| Start bp | 5591 |
|---|
| End bp | 7369 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637715059 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_320253 |
|---|
| Protein GI | 75812635 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT TGTTTAGATA CTTACGAACA AACAAACCCC TACTATTTGG AATATACGGC
GCAATTGGTT GCTTAATTGC GGCGATTTTA CTAGGAGAAC CATTACTGGC CTTAACTAAA
CTTGCACCAT CTTCGCAACA AACTCCCCAA GCAATTGTTT TGTTGATTGA TGCTTCTTCC
AGTATGAGCG ATGGTAAATT AACAGAAGTT AAAACCGCCG CCACGAAATT TGTAGAACGT
CGTAACCTAA CTCAAGATAA ACTTGCTGTA GTCAGTTTTG GATTAGACAT TCAAACCGCT
ACTCCTTTGA CTGATAATGC CGACACTCTT GAAAGTGCGA TCGCCAGTTT ATCAGAAGCT
GGTGGTACTC CTATGGCACA AGGCTTAGAT GCAGCAATAG GAGAGTTGCA GGCTACATTC
CTCAGTCGCA ACATCTTATT ATTTACCGAT GGCGTGCCAG ATTCCCAAGC TCTAGCCTCC
CTGTCCGCCC AATCTGCGAG AAGTCAGAGA ATTAACTTGA TAGCAGTTGC GACTGGTGAC
GCTGACACAA ATTATCTAGC GCAACTTACA GCTGATCCTT CTTTGGTGTT TTATGCCAAT
TCCGGTCAAT TTGACCAAGC CTTCCGCAAT GCTGAGGCTG CTATTTACAA GCAATTAGTC
GAATCTGAAG CAACAGGAGA TTACGGTGTA ATATACTCTG CCCTACGAAC TGGTGGCTGG
ACAGCTTTTC TGGCGATGGG TATAGCACTA GCTCTGATTA TGGGGCAAAA CCACTATATG
CACCGTCGTC TGTTCACATT TAATCAAGGT AGTGTCAGTA CTATAGGCAG TCTAGCGGCT
GGTATGGTTG CAGGCGCAAC TGGTCAATTA CTTTTTTTGC CACTGACAAA TGGTATTCCT
TATATTGCAC TGGTTCAAAG TGTTCTGAAT TGGTCAGTTT TTGGTGCTTT ATTTACAGGT
TTTTTGTCTT TATTTATACG CAGACTCCAA AAACTACAAC TATCGAGTGT CTTACTTACT
GGCGCTATCG GTGGTGCTTT GGCTGCGGGT GCTTGGCTAA TGTCTGCTGC TTATGTAGGA
GATATGTTAG CGCGATTTAT GGCTGCAATT ATTTTTAGTA TCTGTATTCG ACTATTATCT
GGTTCCACCG TATTAAGTTT AGTTGCCTTA ATTGCAATAG CCACCTTTGG TCAATTGGTA
TTTTTATCCA TCCCTGGTTT TTCCATCTTA GACACCATTG GCAGAATCAT CGGCTGGGCA
ATTTTAGGCT TATTGGTAGG TGGAGGAACA CGCTTTTTTG TCCCAAATCT CAAGCTTGAC
AAAGCATTAT TTGGTGGTAG TATCGGCGGT ACTCTAGGAG CTATTGGTTT TTTAGTTGCT
GCGGGAGTTT TTGGAGACAT CCCTGGTCGT TTATCAGGTG CAGCCATATT AGGTTTTTTC
ATTGGTTTGA TGATTGCTTG GGTAGAACAA GAACAATTAA ATCATGAACC GTATCTCTTG
GTGCATTGGA CATCAACAGA AAAAACATCA TTATTACTTG GTGCAAAACC AGTTTTAATT
GGTAGCTCTA TTGATGCTCA AATACCCTTA AATGCCTCGG AAGGATTTAC ACCAATTACA
GCAAAAATTT ATCAAGAAGG AGCCAATATT GTTATGCAAT TTGATCCGGA ATATGCTGGA
CGTAAAAATA TGAAGCAAAC TCTACAAGAA TTAAATGTAG GTGATACCCG CAAGCTTGGT
AACATCACCA TAGAAGTGAA AGCTGCTACT AATCAGTAA
|
|---|
| Protein sequence | MQNLFRYLRT NKPLLFGIYG AIGCLIAAIL LGEPLLALTK LAPSSQQTPQ AIVLLIDASS
SMSDGKLTEV KTAATKFVER RNLTQDKLAV VSFGLDIQTA TPLTDNADTL ESAIASLSEA
GGTPMAQGLD AAIGELQATF LSRNILLFTD GVPDSQALAS LSAQSARSQR INLIAVATGD
ADTNYLAQLT ADPSLVFYAN SGQFDQAFRN AEAAIYKQLV ESEATGDYGV IYSALRTGGW
TAFLAMGIAL ALIMGQNHYM HRRLFTFNQG SVSTIGSLAA GMVAGATGQL LFLPLTNGIP
YIALVQSVLN WSVFGALFTG FLSLFIRRLQ KLQLSSVLLT GAIGGALAAG AWLMSAAYVG
DMLARFMAAI IFSICIRLLS GSTVLSLVAL IAIATFGQLV FLSIPGFSIL DTIGRIIGWA
ILGLLVGGGT RFFVPNLKLD KALFGGSIGG TLGAIGFLVA AGVFGDIPGR LSGAAILGFF
IGLMIAWVEQ EQLNHEPYLL VHWTSTEKTS LLLGAKPVLI GSSIDAQIPL NASEGFTPIT
AKIYQEGANI VMQFDPEYAG RKNMKQTLQE LNVGDTRKLG NITIEVKAAT NQ
|
|---|
| |